Difference between revisions of "CotE"

From SubtiWiki
Jump to: navigation, search
Line 102: Line 102:
 
* '''Operon:''' ''[[cotE]]'' {{PubMed|8760914}}
 
* '''Operon:''' ''[[cotE]]'' {{PubMed|8760914}}
  
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,1691789}}, [[SigK]] {{PubMed|1691789}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotE_1775067_1775612_1 cotE] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigE]] {{PubMed|15699190,1691789}}, [[SigK]] {{PubMed|1691789}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 09:25, 13 April 2012

  • Description: spore coat protein (outer)

Gene name cotE
Synonyms
Essential no
Product spore coat protein (outer)
Function assembly of CotC-CotU complex
Interactions involving this protein in SubtInteract: CotE
MW, pI 20 kDa, 4.139
Gene length, protein length 543 bp, 181 aa
Immediate neighbours ymcA, mutS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CotE context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU17030

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: assembly of the CotC-CotU complex PubMed
  • Protein family: cotE family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:
    • encircles the forespore with a biased accumulation on the mother cell-proximal face of the forespore PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed by casamino acids PubMed
    • expressed during sporulation in the mother cell (SigE, SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Arthur Aronson, Purdue University, West Lafayette, USA homepage

Adriano Henriques, Lisbon, Portugal homepage

Your additional remarks

References

Additional publications: PubMed