Difference between revisions of "YcxA"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
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* '''Operon:''' ''ycxA'' (according to [http://dbtbs.hgc.jp/COG/prom/ycxA.html DBTBS])
 
* '''Operon:''' ''ycxA'' (according to [http://dbtbs.hgc.jp/COG/prom/ycxA.html DBTBS])
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ycxA_403217_404443_1 ycxA] {{PubMed|22383849}}
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 +
* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 14:12, 12 April 2012

  • Description: unknown

Gene name ycxA
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 44 kDa, 8.762
Gene length, protein length 1227 bp, 409 aa
Immediate neighbours srfAD, ycxB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcxA context.gif
This image was kindly provided by SubtiList





Categories containing this gene/protein

membrane proteins, proteins of unknown function

This gene is a member of the following regulons

ComA regulon

The gene

Basic information

  • Locus tag: BSU03530

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: major facilitator superfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ycxA (according to DBTBS)
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Natalia Comella, Alan D Grossman
Conservation of genes and processes controlled by the quorum response in bacteria: characterization of genes controlled by the quorum-sensing transcription factor ComA in Bacillus subtilis.
Mol Microbiol: 2005, 57(4);1159-74
[PubMed:16091051] [WorldCat.org] [DOI] (P p)