Difference between revisions of "YqeI"

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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqeI_2644346_2644636_-1 yqeI] {{PubMed|22383849}}
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=Biological materials =
 
=Biological materials =

Revision as of 11:44, 16 April 2012

  • Description: similar to predicted RNA-binding protein

Gene name yqeI
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 10 kDa, 9.476
Gene length, protein length 288 bp, 96 aa
Immediate neighbours nadD, aroD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YqeI context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

translation

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU25650

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

  • The E. coli homolog: yhbY

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 1LN4 (the YhbY protein of E. coli, 41% identity, 62% similarity) PubMed
  • KEGG entry: [2]
  • E.C. number:

Additional information

  • YqeI might be a RNA-binding protein PubMed. The homolog from E. coli associates to the 50S subunit of the ribosome and is involved in ribosome assembly Ecocyc

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alison Hunt, Joy P Rawlins, Helena B Thomaides, Jeff Errington
Functional analysis of 11 putative essential genes in Bacillus subtilis.
Microbiology (Reading): 2006, 152(Pt 10);2895-2907
[PubMed:17005971] [WorldCat.org] [DOI] (P p)

Gerard J Ostheimer, Alice Barkan, Brian W Matthews
Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins.
Structure: 2002, 10(11);1593-601
[PubMed:12429100] [WorldCat.org] [DOI] (P p)