Difference between revisions of "RsiV"
| Line 20: | Line 20: | ||
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 855 bp, 285 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 855 bp, 285 aa | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigV]]'', ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigV]]'', ''[[oatA]]'' |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB14655]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB14655]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | ||
| Line 35: | Line 35: | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
{{SubtiWiki category|[[sigma factors and their control]]}} | {{SubtiWiki category|[[sigma factors and their control]]}} | ||
| + | {{SubtiWiki category|[[cell envelope stress proteins (controlled by SigM, V, W, X, Y)]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| + | {{SubtiWiki regulon|[[SigV regulon]]}} | ||
| Line 54: | Line 56: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| Line 80: | Line 80: | ||
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' [[SigV]]-[[RsiV]] | + | * '''[[SubtInteract|Interactions]]:''' [[SigV]]-[[RsiV]] |
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
=== Database entries === | === Database entries === | ||
| Line 97: | Line 97: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[sigV]]-[[rsiV]]-[[oatA]]-[[yrhK]]'' {{PubMed|21856855}} | ||
| − | * ''' | + | * '''[[Sigma factor]]:''' [[SigV]] {{PubMed|21856855}} |
| − | |||
| − | |||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** induced by lysozyme ([[SigV]]) {{PubMed|21856855}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 127: | Line 127: | ||
=References= | =References= | ||
| − | + | '''Additional publications:''' {{PubMed|20817771}} | |
<pubmed>14993308,16274938 , </pubmed> | <pubmed>14993308,16274938 , </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 16:51, 24 August 2011
- Description: anti-sigma factor to SigV
| Gene name | rsiV |
| Synonyms | yrhM |
| Essential | no |
| Product | anti-sigma factor to SigV |
| Function | control of SigV activity |
| Interactions involving this protein in SubtInteract: RsiV | |
| MW, pI | 32 kDa, 5.833 |
| Gene length, protein length | 855 bp, 285 aa |
| Immediate neighbours | sigV, oatA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
sigma factors and their control cell envelope stress proteins (controlled by SigM, V, W, X, Y)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU27130
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O05403
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Stephan Zellmeier, Claudia Hofmann, Sylvia Thomas, Thomas Wiegert, Wolfgang Schumann
Identification of sigma(V)-dependent genes of Bacillus subtilis.
FEMS Microbiol Lett: 2005, 253(2);221-9
[PubMed:16274938]
[WorldCat.org]
[DOI]
(P p)
Mika Yoshimura, Kei Asai, Yoshito Sadaie, Hirofumi Yoshikawa
Interaction of Bacillus subtilis extracytoplasmic function (ECF) sigma factors with the N-terminal regions of their potential anti-sigma factors.
Microbiology (Reading): 2004, 150(Pt 3);591-599
[PubMed:14993308]
[WorldCat.org]
[DOI]
(P p)
