Difference between revisions of "GlpP"

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(Extended information on the protein)
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=Expression and regulation=
 
=Expression and regulation=
 
 
* '''Operon:''' ''[[yhxA]]-[[glpP]]'' {{PubMed|2127799}}
 
* '''Operon:''' ''[[yhxA]]-[[glpP]]'' {{PubMed|2127799}}
  
* '''[[Sigma factor]]:'''  
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|21925382}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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* '''Additional information:'''
 
* '''Additional information:'''
 +
** half-life of the mRNA: 3.7 min {{PubMed|21925382}}
 +
** the mRNA is stabilized in '' [[rppH]]'' and ''[[rnjA]]'' mutants {{PubMed|21925382}}
 +
** the mRNA is subject to degradation by [[RNase J1|rnjA]] {{PubMed|21925382}}
  
 
=Biological materials =
 
=Biological materials =
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=References=
 
=References=
  
<pubmed>8825777 11929549 8436953 9595668 9493382 1479885 1809833 182672, </pubmed>
+
<pubmed>8825777 11929549 8436953 9595668 9493382 1479885 1809833 182672, 21925382</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 16:01, 20 September 2011

Gene name glpP
Synonyms
Essential no
Product transcriptional antiterminator
Function regulation of glycerol and glycerol-3-phosphate utilization
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 21 kDa, 8.104
Gene length, protein length 576 bp, 192 aa
Immediate neighbours yhxA, glpF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GlpP context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

utilization of specific carbon sources, utilization of lipids, transcription factors and their control, RNA binding regulators

This gene is a member of the following regulons

The GlpP regulon: glpF-glpK-glpD, glpT-glpQ

The gene

Basic information

  • Locus tag: BSU09270

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Josef Deutscher, Paris-Grignon, France

Your additional remarks

References