Difference between revisions of "YloN"
| Line 1: | Line 1: | ||
| − | * '''Description:''' similar to | + | * '''Description:''' similar to rRNA adenosine methyltransferase for modification 23S rRNA <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || rRNA methyltransferase |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || rRNA modification |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 6.788 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 6.788 | ||
| Line 52: | Line 52: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| − | |||
=The protein= | =The protein= | ||
| Line 62: | Line 59: | ||
* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| − | * '''Protein family:''' RlmN family (according to Swiss-Prot) | + | * '''Protein family:''' RlmN family (according to Swiss-Prot), SAM enzyme superfamily |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| Line 125: | Line 122: | ||
=References= | =References= | ||
| − | + | <pubmed> 18025251 18307109 </pubmed> | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:14, 28 February 2011
- Description: similar to rRNA adenosine methyltransferase for modification 23S rRNA
| Gene name | yloN |
| Synonyms | |
| Essential | no |
| Product | rRNA methyltransferase |
| Function | rRNA modification |
| MW, pI | 41 kDa, 6.788 |
| Gene length, protein length | 1089 bp, 363 aa |
| Immediate neighbours | yloM, prpC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU15750
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: RlmN family (according to Swiss-Prot), SAM enzyme superfamily
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O34617
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Perry A Frey, Adrian D Hegeman, Frank J Ruzicka
The Radical SAM Superfamily.
Crit Rev Biochem Mol Biol: 2008, 43(1);63-88
[PubMed:18307109]
[WorldCat.org]
[DOI]
(I p)
Seok-Ming Toh, Liqun Xiong, Taeok Bae, Alexander S Mankin
The methyltransferase YfgB/RlmN is responsible for modification of adenosine 2503 in 23S rRNA.
RNA: 2008, 14(1);98-106
[PubMed:18025251]
[WorldCat.org]
[DOI]
(I p)
