Difference between revisions of "Program"
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* 14:30 – 14:45 Gyanendra P. Dubey, and [[Sigal Ben-Yehuda]] (Hebrew University; Jerusalem, Israel) | * 14:30 – 14:45 Gyanendra P. Dubey, and [[Sigal Ben-Yehuda]] (Hebrew University; Jerusalem, Israel) | ||
− | **Intercellular nanotubes mediate bacterial communication | + | ** Intercellular nanotubes mediate bacterial communication |
* 14:45 – 15:00 Akos T. Kovacs, and [[Oscar Kuipers|Oscar P. Kuipers]] (University of Groningen, Netherlands) | * 14:45 – 15:00 Akos T. Kovacs, and [[Oscar Kuipers|Oscar P. Kuipers]] (University of Groningen, Netherlands) | ||
− | **Regulation of architecturally complex colony development in ''Bacillus subtilis'' | + | ** Regulation of architecturally complex colony development in ''Bacillus subtilis'' |
* 15:00 – 15:15 Noël Molière, Janine Kirstein, and [[Kürsad Turgay|Kürşad Turgay]] (Freie Universität Berlin, Germany; and Northwestern University, Evanston, IL USA) | * 15:00 – 15:15 Noël Molière, Janine Kirstein, and [[Kürsad Turgay|Kürşad Turgay]] (Freie Universität Berlin, Germany; and Northwestern University, Evanston, IL USA) | ||
− | Involvement of Hsp100/Clp proteases in the motility development of ''Bacillus subtilis'' | + | ** Involvement of Hsp100/Clp proteases in the motility development of ''Bacillus subtilis'' |
* 15:15 – 15:30 Sophie Bochmann, Benedikt Sattler, Sebastian W. Fuchs, Peter Kötter, and Karl-Dieter Entian (Goethe University, Frankfurt am Main, Germany) | * 15:15 – 15:30 Sophie Bochmann, Benedikt Sattler, Sebastian W. Fuchs, Peter Kötter, and Karl-Dieter Entian (Goethe University, Frankfurt am Main, Germany) | ||
− | Analysis of lantibiotic immunity and regulation in ''Bacillus subtilis'' | + | ** Analysis of lantibiotic immunity and regulation in ''Bacillus subtilis'' |
* 15:30 – 15:45 Anna Staroń, Sebastian Dintner, Georg Fritz, Ulrich Gerland, Susanne Gebhard, and [[Thorsten Mascher]] (Ludwig-Maximilians-Universität München, Germany) | * 15:30 – 15:45 Anna Staroń, Sebastian Dintner, Georg Fritz, Ulrich Gerland, Susanne Gebhard, and [[Thorsten Mascher]] (Ludwig-Maximilians-Universität München, Germany) | ||
− | Peptide Antibiotic Sensing and Detoxification Modules of ''Bacillus subtilis'': Stimulus Specificity, Signalling Interfaces and Regulatory Dynamics | + | ** Peptide Antibiotic Sensing and Detoxification Modules of ''Bacillus subtilis'': Stimulus Specificity, Signalling Interfaces and Regulatory Dynamics |
* 15:45 – 16:15 Coffee Break | * 15:45 – 16:15 Coffee Break | ||
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* 16:15 – 16:30 Frank Bürmann, Nina Ebert, Suey van Baarle, and [[Marc Bramkamp]] (University of Cologne, Germany) | * 16:15 – 16:30 Frank Bürmann, Nina Ebert, Suey van Baarle, and [[Marc Bramkamp]] (University of Cologne, Germany) | ||
− | A bacterial dynamin-like protein mediating nucleotide independent membrane fusion | + | ** A bacterial dynamin-like protein mediating nucleotide independent membrane fusion |
* 16:30 – 16:45 [[Daniel Lopez]] (Institute for Molecular Infectious Diseases, Würzburg, Germany) | * 16:30 – 16:45 [[Daniel Lopez]] (Institute for Molecular Infectious Diseases, Würzburg, Germany) | ||
− | Targeting Lipid Rafts in Bacteria | + | ** Targeting Lipid Rafts in Bacteria |
* 16:45 – 17:00 Tjeerd van Rij, Isabelle Maillet, Thomas Lapointe, Marcel Hillebrand, Sabrina Rodriguez, [[Jan Maarten van Dijl]], and [[Zoltan Pragai|Zoltán Prágai]] (DSM Biotechnology Center, Delft, the Netherlands; DSM Nutritional Products, Basel, Switzerland; and UMCG-University of Groningen, the Netherlands) | * 16:45 – 17:00 Tjeerd van Rij, Isabelle Maillet, Thomas Lapointe, Marcel Hillebrand, Sabrina Rodriguez, [[Jan Maarten van Dijl]], and [[Zoltan Pragai|Zoltán Prágai]] (DSM Biotechnology Center, Delft, the Netherlands; DSM Nutritional Products, Basel, Switzerland; and UMCG-University of Groningen, the Netherlands) | ||
− | Secretome of the industrial ''Bacillus amyloliquefaciens'' strain BZ9 | + | ** Secretome of the industrial ''Bacillus amyloliquefaciens'' strain BZ9 |
* 17:00 – 17:15 Simon Stammen, Claudia Korneli, Britta K. Müller, Tobias Knuuti, Constanze Finger, Ezequiel Franco-Lara, Dieter Jahn, and Rebekka Biedendieck (Technische Universität Braunschweig, Germany) | * 17:00 – 17:15 Simon Stammen, Claudia Korneli, Britta K. Müller, Tobias Knuuti, Constanze Finger, Ezequiel Franco-Lara, Dieter Jahn, and Rebekka Biedendieck (Technische Universität Braunschweig, Germany) | ||
− | High-yield intra- and extracellular protein production using ''Bacillus megaterium'' | + | ** High-yield intra- and extracellular protein production using ''Bacillus megaterium'' |
* 17:15 – 17:30 Krzysztof Gizynski, Susanne Pohl and [[Colin Harwood|Colin R. Harwood]] (Newcastle University, Newcastle upon Tyne, United Kingdom) | * 17:15 – 17:30 Krzysztof Gizynski, Susanne Pohl and [[Colin Harwood|Colin R. Harwood]] (Newcastle University, Newcastle upon Tyne, United Kingdom) | ||
− | The secondary protein secretion translocase of'' Bacillus anthracis'' | + | ** The secondary protein secretion translocase of'' Bacillus anthracis'' |
==Session III: Replication–Cell cycle== | ==Session III: Replication–Cell cycle== | ||
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* 17:30 – 17:45 V. Bidnenko, S. McGovern, F. Lecointe, [[Philippe Noirot|P. Noirot]], and M.-F. Noirot-Gros (INRA, Jouy en Josas, France) | * 17:30 – 17:45 V. Bidnenko, S. McGovern, F. Lecointe, [[Philippe Noirot|P. Noirot]], and M.-F. Noirot-Gros (INRA, Jouy en Josas, France) | ||
− | The ''B. subtilis'' negative controller of replication initiation [[YabA]] acts as a replication checkpoint | + | ** The ''B. subtilis'' negative controller of replication initiation [[YabA]] acts as a replication checkpoint |
* 17.45 – 18.00 Hamid Nouri, Anne-Françoise Monnier, Olivier Rannou, Monika Maciag, Solveig Fossum, Armelle Cabin-Flaman, Gregorz Wegrzyn, Vic Norris, Agnieszka Szalewska-Palasz, Panos Soultanas, Kirsten Skarstad, and [[Laurent Janniere|Laurent Jannière]] (INRA, Jouy en Josas, France; Génopole Campus I, Evry, France; University of Nottingham, UK; University of Gdansk, Poland; Rikshospitalet, University of Oslo, Norway; and Faculté des Sciences de Rouen, Mont-Saint-Aignan, France) | * 17.45 – 18.00 Hamid Nouri, Anne-Françoise Monnier, Olivier Rannou, Monika Maciag, Solveig Fossum, Armelle Cabin-Flaman, Gregorz Wegrzyn, Vic Norris, Agnieszka Szalewska-Palasz, Panos Soultanas, Kirsten Skarstad, and [[Laurent Janniere|Laurent Jannière]] (INRA, Jouy en Josas, France; Génopole Campus I, Evry, France; University of Nottingham, UK; University of Gdansk, Poland; Rikshospitalet, University of Oslo, Norway; and Faculté des Sciences de Rouen, Mont-Saint-Aignan, France) | ||
− | Does glycolysis gate [[DNA replication]] in the ''Bacillus subtilis'' cell cycle? | + | ** Does glycolysis gate [[DNA replication]] in the ''Bacillus subtilis'' cell cycle? |
* 18.00 – 18.15 Vladimir Bidnenko, Lei Shi, Ahasanul Kobir, Magali Rault-Ventroux, Alain Trubuil, Marie-Françoise Noirot-Gros, and [[Ivan Mijakovic]] (INRA- AgroParisTech, and INRA, Jouy-en-Josas, France) | * 18.00 – 18.15 Vladimir Bidnenko, Lei Shi, Ahasanul Kobir, Magali Rault-Ventroux, Alain Trubuil, Marie-Françoise Noirot-Gros, and [[Ivan Mijakovic]] (INRA- AgroParisTech, and INRA, Jouy-en-Josas, France) | ||
− | Phosphorylated bacterial recombinase checks chromosome integrity during spore formation | + | ** Phosphorylated bacterial recombinase checks chromosome integrity during spore formation |
* 18.15 – 18.30 [[Imrich Barak|Imrich Barák]], Naďa Pavlendová, Ján Jamoroškovič, [[Tony Wilkinson|Anthony J. Wilkinson]], and Katarína Muchová (Slovak Academy of Sciences, Bratislava, Slovakia; and University of York, UK) | * 18.15 – 18.30 [[Imrich Barak|Imrich Barák]], Naďa Pavlendová, Ján Jamoroškovič, [[Tony Wilkinson|Anthony J. Wilkinson]], and Katarína Muchová (Slovak Academy of Sciences, Bratislava, Slovakia; and University of York, UK) | ||
− | Min system oscillation is adverse for asymmetric cell division during ''Bacillus subtilis'' sporulation | + | ** Min system oscillation is adverse for asymmetric cell division during ''Bacillus subtilis'' sporulation |
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==Session IV: RNA biology of ''Bacillus''== | ==Session IV: RNA biology of ''Bacillus''== | ||
− | Chair: Tony Wilkinson | + | Chair: [[Tony Wilkinson]] |
* 8.45 – 9.00 Pierre Nicolas, [[Ulrike Mäder]], Etienne Dervyn, Tatiana Rochat, Aurélie Leduc, Nathalie Pigeonneau, Elena Bidnenko, Elodie Marchadier, the BaSysBio consortium, [[Michael Hecker]], [[Uwe Völker]], [[Philippe Bessières]], and [[Philippe Noirot]] (INRA, Jouy-en-Josas, France; Ernst-Moritz-Arndt-Universität Greifswald, Germany; and INRA-AgroParisTech, Jouy-en-Josas, France) | * 8.45 – 9.00 Pierre Nicolas, [[Ulrike Mäder]], Etienne Dervyn, Tatiana Rochat, Aurélie Leduc, Nathalie Pigeonneau, Elena Bidnenko, Elodie Marchadier, the BaSysBio consortium, [[Michael Hecker]], [[Uwe Völker]], [[Philippe Bessières]], and [[Philippe Noirot]] (INRA, Jouy-en-Josas, France; Ernst-Moritz-Arndt-Universität Greifswald, Germany; and INRA-AgroParisTech, Jouy-en-Josas, France) | ||
− | + | ** Quantitative and qualitative analysis of the ''Bacillus subtilis'' whole-transcriptome across [[lifestyles]] | |
* 9.00 – 9.15 Marc Schaffer, Anja Wiechert, Hanna Daniel, Claudia Schurmann, Georg Homuth, [[Michael Hecker]], Volkmar Liebscher, and [[Ulrike Mäder]] (Ernst- Moritz-Arndt-University Greifswald, Germany) | * 9.00 – 9.15 Marc Schaffer, Anja Wiechert, Hanna Daniel, Claudia Schurmann, Georg Homuth, [[Michael Hecker]], Volkmar Liebscher, and [[Ulrike Mäder]] (Ernst- Moritz-Arndt-University Greifswald, Germany) | ||
− | Genome-wide analysis of mRNA half-lives in ''Bacillus subtilis'' | + | ** Genome-wide analysis of mRNA half-lives in ''Bacillus subtilis'' |
− | 9.15 - 9.30 Ruben A. T. Mars, Emma L. Denham, Pierre Nicolas, Philippe Noirot, Ulrike Mäder, Jan Maarten van Dijl and the BaSysBio and BACELL SysMo consortia (UMCG-University of Groningen, the Netherlands; INRA, Jouy-en-Josas, France; INRA-AgroParisTech, Jouy-en-Josas , France; and Ernst-Moritz-Arndt-University Greifswald, Germany) | + | * 9.15 - 9.30 Ruben A. T. Mars, Emma L. Denham, Pierre Nicolas, [[Philippe Noirot]], [[Ulrike Mäder]], [[Jan Maarten van Dijl]] and the BaSysBio and BACELL SysMo consortia (UMCG-University of Groningen, the Netherlands; INRA, Jouy-en-Josas, France; INRA-AgroParisTech, Jouy-en-Josas , France; and Ernst-Moritz-Arndt-University Greifswald, Germany) |
− | The non-coding RNAs of Bacillus subtilis | + | ** The [[ncRNA|non-coding RNAs]] of ''Bacillus subtilis'' |
− | 9.30 – 9.45 Matthias Gimpel, Heike Preis, Natalie Jahn, Nadja Heidrich, Andreas Licht, Ulrike Mäder, and Sabine Brantl (Friedrich-Schiller-Universität, Jena, Germany; Universität Würzburg, Germany; Jena Bioscience GmbH, Jena, Germany; Ernst-Moritz-Arndt-Universität Greifswald, Germany) | + | * 9.30 – 9.45 Matthias Gimpel, Heike Preis, Natalie Jahn, Nadja Heidrich, Andreas Licht, [[Ulrike Mäder]], and [[Sabine Brantl]] (Friedrich-Schiller-Universität, Jena, Germany; Universität Würzburg, Germany; Jena Bioscience GmbH, Jena, Germany; Ernst-Moritz-Arndt-Universität Greifswald, Germany) |
− | Two sRNA regulated systems from the Bacillus subtilis chromosome | + | ** Two [[ncRNA|sRNA]] regulated systems from the ''Bacillus subtilis'' chromosome |
− | 9.45 – 10.00 Martin Lehnik, Christina Herzberg, Marc Schaffer, Ulrike Mäder, Christine Diethmaier, and Jörg Stülke (Georg-August-Universität Göttingen, Germany; Ernst-Moritz-Arndt-University Greifswald, Germany) | + | * 9.45 – 10.00 Martin Lehnik, Christina Herzberg, Marc Schaffer, [[Ulrike Mäder]], Christine Diethmaier, and [[Jörg Stülke]] (Georg-August-Universität Göttingen, Germany; Ernst-Moritz-Arndt-University Greifswald, Germany) |
− | Structural and functional association of RNases in Bacillus subtilis | + | ** Structural and functional association of [[RNases]] in [[Bacillus subtilis]] |
− | 10.00 – 10.15 Karen Shahbabian, Ailar Jamalli, Léna Zig, and Harald Putzer (CNRS Paris, France) | + | * 10.00 – 10.15 Karen Shahbabian, Ailar Jamalli, Léna Zig, and [[Harald Putzer]] (CNRS Paris, France) |
− | RNase Y and RNase J, the two major players in mRNA metabolism in Bacillus subtilis | + | ** [[RNase Y]] and [[rnjA|RNase J]], the two major players in mRNA metabolism in ''Bacillus subtilis'' |
− | 10.15 – 10.30 Joseph A. Newman, Lorraine Hewitt, Cecilia Rodrigues, Alexandra Solovyova, Colin R. Harwood, and Richard J. Lewis (Newcastle University, Newcastle-upon-Tyne, U.K.) | + | * 10.15 – 10.30 Joseph A. Newman, Lorraine Hewitt, Cecilia Rodrigues, Alexandra Solovyova, [[Colin Harwood|Colin R. Harwood]], and [[Rick Lewis|Richard J. Lewis]] (Newcastle University, Newcastle-upon-Tyne, U.K.) |
− | Unusual, dual endo- and exo-nuclease activity in the degradosome explained by crystal structure analysis of RNase J1 | + | ** Unusual, dual endo- and exo-nuclease activity in the degradosome explained by crystal structure analysis of [[rnjA|RNase J1]] |
− | 10.30 – 11.00 Coffee/Tea | + | * 10.30 – 11.00 Coffee/Tea |
+ | |||
+ | ==Session IV; RNA biology of ''Bacillus''; continued== | ||
+ | Chair: [[Ulrike Mäder]] | ||
− | |||
− | |||
11.00 – 11.15 Katharina Schäfer, Ulrike Mäder, Georg Homuth, and Thomas Wiegert (University of Bayreuth, Germany; Ernst-Moritz-Arndt-University Greifswald, Germany; and University of Applied Sciences, Zittau/Görlitz, Germany) | 11.00 – 11.15 Katharina Schäfer, Ulrike Mäder, Georg Homuth, and Thomas Wiegert (University of Bayreuth, Germany; Ernst-Moritz-Arndt-University Greifswald, Germany; and University of Applied Sciences, Zittau/Görlitz, Germany) | ||
− | Analysis of Rho-dependent termination of the Bacillus subtilis sigX-rsiX operon | + | ** Analysis of Rho-dependent termination of the Bacillus subtilis sigX-rsiX operon |
− | 11.15 – 11.30 Anne R. Karow, Regula Aregger, and Dagmar Klostermeier (University of Basel, Biozentrum, Switzerland; and University of Muenster, Germany | + | 11.15 – 11.30 Anne R. Karow, Regula Aregger, and Dagmar Klostermeier (University of Basel, Biozentrum, Switzerland; and University of Muenster, Germany |
− | + | ** Dissecting the mechanism of the DEAD box protein YxiN from Bacillus subtilis | |
11.30 – 11.45 Hermann Hämmerle, Branislav Večerek, Ivo Hofacker, and Udo Bläsi (Max F. Perutz Laboratories, University of Vienna, Austria; Czech Academy of Sciences, Prague, Czech Republic; and Institute for Theoretical Chemistry, University of Vienna, Austria) | 11.30 – 11.45 Hermann Hämmerle, Branislav Večerek, Ivo Hofacker, and Udo Bläsi (Max F. Perutz Laboratories, University of Vienna, Austria; Czech Academy of Sciences, Prague, Czech Republic; and Institute for Theoretical Chemistry, University of Vienna, Austria) | ||
− | Identification of candidate Hfq targets in Bacillus subtilis | + | ** Identification of candidate Hfq targets in Bacillus subtilis |
11.45 – 12.00 Sandra Wiegand, Sascha Dietrich, and Heiko Liesegang (Georg-August-University of Göttingen, Germany) | 11.45 – 12.00 Sandra Wiegand, Sascha Dietrich, and Heiko Liesegang (Georg-August-University of Göttingen, Germany) | ||
− | Regulatory elements of Bacillus licheniformis DSM 13 | + | ** Regulatory elements of Bacillus licheniformis DSM 13 |
Session V: Tools | Session V: Tools | ||
Chair: Ulrike Mäder (continued) | Chair: Ulrike Mäder (continued) | ||
12.00 – 12.15 Jan Muntel, Vincent Fromion, Michael Hecker and Dörte Becher (Ernst-Moritz-Arndt-University of Greifswald, Germany; and INRA, Jouy-en-Josas, France) | 12.00 – 12.15 Jan Muntel, Vincent Fromion, Michael Hecker and Dörte Becher (Ernst-Moritz-Arndt-University of Greifswald, Germany; and INRA, Jouy-en-Josas, France) | ||
− | New approach for global absolute protein quantification of B. subtilis | + | ** New approach for global absolute protein quantification of B. subtilis |
12.15 – 12.30 Valérie Leclère, Maude Pupin; Walaa Hussein, Max Béchet, Frédérique Gancel, Marlène Chollet, Ségolène Caboche, and Philippe Jacques (Université de Lille Nord de France, Sciences et Technologies, Villeneuve d'Ascq, France) | 12.15 – 12.30 Valérie Leclère, Maude Pupin; Walaa Hussein, Max Béchet, Frédérique Gancel, Marlène Chollet, Ségolène Caboche, and Philippe Jacques (Université de Lille Nord de France, Sciences et Technologies, Villeneuve d'Ascq, France) | ||
− | Bioinformatics tools to decrypt non-ribosomal peptide diversity in bacilli | + | ** Bioinformatics tools to decrypt non-ribosomal peptide diversity in bacilli |
12.30 – 14.00 Lunch (+ BACIP meeting) | 12.30 – 14.00 Lunch (+ BACIP meeting) | ||
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Chair: Sabine Brantl | Chair: Sabine Brantl | ||
14.00 – 14.15 Airat Kayumov, Annette Heinrich, Kseniya Fedorova, Olga Ilinskaya, and Karl Forchhammer (Kazan State University of Architecture and Engineering, Kazan, Russia; and Eberhard-Karls-Universität Tübingen, Germany) | 14.00 – 14.15 Airat Kayumov, Annette Heinrich, Kseniya Fedorova, Olga Ilinskaya, and Karl Forchhammer (Kazan State University of Architecture and Engineering, Kazan, Russia; and Eberhard-Karls-Universität Tübingen, Germany) | ||
− | Interaction of the general transcription factor TnrA with the PII-like protein GlnK and glutamine synthetase in Bacillus subtilis | + | ** Interaction of the general transcription factor TnrA with the PII-like protein GlnK and glutamine synthetase in Bacillus subtilis |
14.15 – 14.30 Jens Landmann, Ricarda Busse, Jörg Stülke, and Boris Görke (Georg-August-University of Göttingen, Germany) | 14.15 – 14.30 Jens Landmann, Ricarda Busse, Jörg Stülke, and Boris Görke (Georg-August-University of Göttingen, Germany) | ||
− | Regulation of a glycolytic bypass by Crh, the homolog of the phospho-carrier protein HPr in Bacillus subtilis | + | ** Regulation of a glycolytic bypass by Crh, the homolog of the phospho-carrier protein HPr in Bacillus subtilis |
14.30 – 14.45 Alexander K.W. Elsholz, Dan Oertel, Katrin Gronau, Dörte Becher, Kürsad Turgay, Michael Hecker, and Ulf Gerth (Ernst-Moritz-Arndt-University of Greifswald, Germany; and Freie Universität Berlin, Germany) | 14.30 – 14.45 Alexander K.W. Elsholz, Dan Oertel, Katrin Gronau, Dörte Becher, Kürsad Turgay, Michael Hecker, and Ulf Gerth (Ernst-Moritz-Arndt-University of Greifswald, Germany; and Freie Universität Berlin, Germany) | ||
− | Arginine phosphorylation modulates ClpC activity in Bacillus subtilis | + | ** Arginine phosphorylation modulates ClpC activity in Bacillus subtilis |
14.45 – 15.00 Ines Gruner, Anika March, Claudia Frädrich, and Elisabeth Härtig (Technical University of Braunschweig, Germany) | 14.45 – 15.00 Ines Gruner, Anika March, Claudia Frädrich, and Elisabeth Härtig (Technical University of Braunschweig, Germany) | ||
− | Regulation of anaerobic adaptation of Bacillus subtilis | + | ** Regulation of anaerobic adaptation of Bacillus subtilis |
15.00 – 15.15 Marcus Miethke, Florian Peuckert, and Mohamed A. Marahiel (Philipps University of Marburg, Germany) | 15.00 – 15.15 Marcus Miethke, Florian Peuckert, and Mohamed A. Marahiel (Philipps University of Marburg, Germany) | ||
− | Ferric siderophore uptake and intracellular iron release in Bacillus subtilis and Bacillus halodurans | + | ** Ferric siderophore uptake and intracellular iron release in Bacillus subtilis and Bacillus halodurans |
15.15 – 15.30 S. Graf, and G. Unden (Universität Mainz, Germany) | 15.15 – 15.30 S. Graf, and G. Unden (Universität Mainz, Germany) | ||
− | The fumarate sensor DcuS of Geobacillus kaustophilus | + | ** The fumarate sensor DcuS of Geobacillus kaustophilus |
15.30 – 15.45 Ken-ichi Yoshida (Kobe University, Kobe, Japan) | 15.30 – 15.45 Ken-ichi Yoshida (Kobe University, Kobe, Japan) | ||
− | Natural interconversion of inositol stereoisomers in bacteria? | + | ** Natural interconversion of inositol stereoisomers in bacteria? |
15.45 – 16.15 Coffee/Tea | 15.45 – 16.15 Coffee/Tea | ||
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Chair: Dörte Becher | Chair: Dörte Becher | ||
16.15 – 16.30 Eric Botella, Sebastian Hübner, and Kevin M Devine (Trinity College Dublin, Ireland) | 16.15 – 16.30 Eric Botella, Sebastian Hübner, and Kevin M Devine (Trinity College Dublin, Ireland) | ||
− | Cell envelope gene expression in phosphate limited Bacillus subtilis cells | + | ** Cell envelope gene expression in phosphate limited Bacillus subtilis cells |
16.30 – 16.45 Robyn T. Eijlander, and Oscar P. Kuipers (TI Food and Nutrition, Wageningen, the Netherlands; and University of Groningen, the Netherlands) | 16.30 – 16.45 Robyn T. Eijlander, and Oscar P. Kuipers (TI Food and Nutrition, Wageningen, the Netherlands; and University of Groningen, the Netherlands) | ||
− | Studying Bacillus cereus sporulation and germination at the single cell level | + | ** Studying Bacillus cereus sporulation and germination at the single cell level |
16.45 – 17.00 Anthony J. Wilkinson (University of York, UK) | 16.45 – 17.00 Anthony J. Wilkinson (University of York, UK) | ||
− | Structural and interaction studies of an intercellular zipper mediating engulfment during sporulation in B. subtilis | + | ** Structural and interaction studies of an intercellular zipper mediating engulfment during sporulation in B. subtilis |
Session VIII: Gram-positive pathogens | Session VIII: Gram-positive pathogens | ||
Chair: Imrich Barak | Chair: Imrich Barak | ||
17.00 – 17.15 Simen M. Kristoffersen, Nicolas J. Tourasse, Timothy D. Read, Brian Desany, Anne-Brit Kolstø, and Ole Andreas Økstad (School of Pharmacy, University of Oslo, Norway; Emory University School of Medicine, Atlanta, GA, USA; and Life Sciences, A Roche Company, Branford, USA) | 17.00 – 17.15 Simen M. Kristoffersen, Nicolas J. Tourasse, Timothy D. Read, Brian Desany, Anne-Brit Kolstø, and Ole Andreas Økstad (School of Pharmacy, University of Oslo, Norway; Emory University School of Medicine, Atlanta, GA, USA; and Life Sciences, A Roche Company, Branford, USA) | ||
− | Eighteen interspersed DNA repeat elements in the Bacillus cereus group promote genome dynamics and plasticity, and may confer global and local effects on neighbour gene transcription | + | ** Eighteen interspersed DNA repeat elements in the Bacillus cereus group promote genome dynamics and plasticity, and may confer global and local effects on neighbour gene transcription |
17.15 – 17.30 Susanne Pohl, Wang Yung Tu, Nigel Robinson, Kevin Waldron, and Colin Harwood (Newcastle University, Newcastle upon Tyne, United Kingdom) | 17.15 – 17.30 Susanne Pohl, Wang Yung Tu, Nigel Robinson, Kevin Waldron, and Colin Harwood (Newcastle University, Newcastle upon Tyne, United Kingdom) | ||
− | The superoxide oxidative stress response of Bacillus anthracis | + | ** The superoxide oxidative stress response of Bacillus anthracis |
17.30 – 17.45 Vahid Farshchi Andisi, Anne de Jong, Oscar P. Kuipers, and Jetta J.E. Bijlsma (UMCG-University of Groningen, the Netherlands; and University of Groningen, the Netherlands) | 17.30 – 17.45 Vahid Farshchi Andisi, Anne de Jong, Oscar P. Kuipers, and Jetta J.E. Bijlsma (UMCG-University of Groningen, the Netherlands; and University of Groningen, the Netherlands) | ||
− | Identification of a Streptococcus pneumoniae protein involved in resistance to oxidative stress | + | ** Identification of a Streptococcus pneumoniae protein involved in resistance to oxidative stress |
17.45 – 18.00 Annette Dreisbach, Magdalena M. van der Kooi-Pol, Andreas Otto, Katrin Gronau, Hendrik P. J. Bonarius, Hans Westra, Herman Groen, Dörte Becher, Michael Hecker, and Jan Maarten van Dijl (UMCG-University of Groningen, the Netherlands; Ernst-Moritz-Arndt-Universität, Greifswald, Germany; and IQ Therapeutics, Groningen, the Netherlands) | 17.45 – 18.00 Annette Dreisbach, Magdalena M. van der Kooi-Pol, Andreas Otto, Katrin Gronau, Hendrik P. J. Bonarius, Hans Westra, Herman Groen, Dörte Becher, Michael Hecker, and Jan Maarten van Dijl (UMCG-University of Groningen, the Netherlands; Ernst-Moritz-Arndt-Universität, Greifswald, Germany; and IQ Therapeutics, Groningen, the Netherlands) | ||
− | + | ** Profiling of global interactions between human serum proteins and the Staphylococcus aureus cell surface |
Revision as of 10:44, 14 February 2011
Monday March 14th 2011
Registration: 12.30 – 13.45
13.50 - 14.00 Jörg Stülke Welcome and Introduction
Session I: Signalling, motility and biofilm formation
Chair: Eugenio Ferrari
- 14:00 – 14:30 Daniel Kearns: invited speaker
- 14:30 – 14:45 Gyanendra P. Dubey, and Sigal Ben-Yehuda (Hebrew University; Jerusalem, Israel)
- Intercellular nanotubes mediate bacterial communication
- 14:45 – 15:00 Akos T. Kovacs, and Oscar P. Kuipers (University of Groningen, Netherlands)
- Regulation of architecturally complex colony development in Bacillus subtilis
- 15:00 – 15:15 Noël Molière, Janine Kirstein, and Kürşad Turgay (Freie Universität Berlin, Germany; and Northwestern University, Evanston, IL USA)
- Involvement of Hsp100/Clp proteases in the motility development of Bacillus subtilis
- 15:15 – 15:30 Sophie Bochmann, Benedikt Sattler, Sebastian W. Fuchs, Peter Kötter, and Karl-Dieter Entian (Goethe University, Frankfurt am Main, Germany)
- Analysis of lantibiotic immunity and regulation in Bacillus subtilis
- 15:30 – 15:45 Anna Staroń, Sebastian Dintner, Georg Fritz, Ulrich Gerland, Susanne Gebhard, and Thorsten Mascher (Ludwig-Maximilians-Universität München, Germany)
- Peptide Antibiotic Sensing and Detoxification Modules of Bacillus subtilis: Stimulus Specificity, Signalling Interfaces and Regulatory Dynamics
- 15:45 – 16:15 Coffee Break
Session II: Localisation and secretion
Chair: Thomas Wiegert
- 16:15 – 16:30 Frank Bürmann, Nina Ebert, Suey van Baarle, and Marc Bramkamp (University of Cologne, Germany)
- A bacterial dynamin-like protein mediating nucleotide independent membrane fusion
- 16:30 – 16:45 Daniel Lopez (Institute for Molecular Infectious Diseases, Würzburg, Germany)
- Targeting Lipid Rafts in Bacteria
- 16:45 – 17:00 Tjeerd van Rij, Isabelle Maillet, Thomas Lapointe, Marcel Hillebrand, Sabrina Rodriguez, Jan Maarten van Dijl, and Zoltán Prágai (DSM Biotechnology Center, Delft, the Netherlands; DSM Nutritional Products, Basel, Switzerland; and UMCG-University of Groningen, the Netherlands)
- Secretome of the industrial Bacillus amyloliquefaciens strain BZ9
- 17:00 – 17:15 Simon Stammen, Claudia Korneli, Britta K. Müller, Tobias Knuuti, Constanze Finger, Ezequiel Franco-Lara, Dieter Jahn, and Rebekka Biedendieck (Technische Universität Braunschweig, Germany)
- High-yield intra- and extracellular protein production using Bacillus megaterium
- 17:15 – 17:30 Krzysztof Gizynski, Susanne Pohl and Colin R. Harwood (Newcastle University, Newcastle upon Tyne, United Kingdom)
- The secondary protein secretion translocase of Bacillus anthracis
Session III: Replication–Cell cycle
Chair: Thorsten Mascher
- 17:30 – 17:45 V. Bidnenko, S. McGovern, F. Lecointe, P. Noirot, and M.-F. Noirot-Gros (INRA, Jouy en Josas, France)
- The B. subtilis negative controller of replication initiation YabA acts as a replication checkpoint
- 17.45 – 18.00 Hamid Nouri, Anne-Françoise Monnier, Olivier Rannou, Monika Maciag, Solveig Fossum, Armelle Cabin-Flaman, Gregorz Wegrzyn, Vic Norris, Agnieszka Szalewska-Palasz, Panos Soultanas, Kirsten Skarstad, and Laurent Jannière (INRA, Jouy en Josas, France; Génopole Campus I, Evry, France; University of Nottingham, UK; University of Gdansk, Poland; Rikshospitalet, University of Oslo, Norway; and Faculté des Sciences de Rouen, Mont-Saint-Aignan, France)
- Does glycolysis gate DNA replication in the Bacillus subtilis cell cycle?
- 18.00 – 18.15 Vladimir Bidnenko, Lei Shi, Ahasanul Kobir, Magali Rault-Ventroux, Alain Trubuil, Marie-Françoise Noirot-Gros, and Ivan Mijakovic (INRA- AgroParisTech, and INRA, Jouy-en-Josas, France)
- Phosphorylated bacterial recombinase checks chromosome integrity during spore formation
- 18.15 – 18.30 Imrich Barák, Naďa Pavlendová, Ján Jamoroškovič, Anthony J. Wilkinson, and Katarína Muchová (Slovak Academy of Sciences, Bratislava, Slovakia; and University of York, UK)
- Min system oscillation is adverse for asymmetric cell division during Bacillus subtilis sporulation
18:30 – 19.30 BACELL Steering group meeting
20.00 Dinner
Tuesday March 15th 2011
- 8.40 – 8.45 Jörg Stülke
Welcome to session: RNA biology of Bacillus
Session IV: RNA biology of Bacillus
Chair: Tony Wilkinson
- 8.45 – 9.00 Pierre Nicolas, Ulrike Mäder, Etienne Dervyn, Tatiana Rochat, Aurélie Leduc, Nathalie Pigeonneau, Elena Bidnenko, Elodie Marchadier, the BaSysBio consortium, Michael Hecker, Uwe Völker, Philippe Bessières, and Philippe Noirot (INRA, Jouy-en-Josas, France; Ernst-Moritz-Arndt-Universität Greifswald, Germany; and INRA-AgroParisTech, Jouy-en-Josas, France)
- Quantitative and qualitative analysis of the Bacillus subtilis whole-transcriptome across lifestyles
- 9.00 – 9.15 Marc Schaffer, Anja Wiechert, Hanna Daniel, Claudia Schurmann, Georg Homuth, Michael Hecker, Volkmar Liebscher, and Ulrike Mäder (Ernst- Moritz-Arndt-University Greifswald, Germany)
- Genome-wide analysis of mRNA half-lives in Bacillus subtilis
- 9.15 - 9.30 Ruben A. T. Mars, Emma L. Denham, Pierre Nicolas, Philippe Noirot, Ulrike Mäder, Jan Maarten van Dijl and the BaSysBio and BACELL SysMo consortia (UMCG-University of Groningen, the Netherlands; INRA, Jouy-en-Josas, France; INRA-AgroParisTech, Jouy-en-Josas , France; and Ernst-Moritz-Arndt-University Greifswald, Germany)
- The non-coding RNAs of Bacillus subtilis
- 9.30 – 9.45 Matthias Gimpel, Heike Preis, Natalie Jahn, Nadja Heidrich, Andreas Licht, Ulrike Mäder, and Sabine Brantl (Friedrich-Schiller-Universität, Jena, Germany; Universität Würzburg, Germany; Jena Bioscience GmbH, Jena, Germany; Ernst-Moritz-Arndt-Universität Greifswald, Germany)
- Two sRNA regulated systems from the Bacillus subtilis chromosome
- 9.45 – 10.00 Martin Lehnik, Christina Herzberg, Marc Schaffer, Ulrike Mäder, Christine Diethmaier, and Jörg Stülke (Georg-August-Universität Göttingen, Germany; Ernst-Moritz-Arndt-University Greifswald, Germany)
- Structural and functional association of RNases in Bacillus subtilis
- 10.00 – 10.15 Karen Shahbabian, Ailar Jamalli, Léna Zig, and Harald Putzer (CNRS Paris, France)
- 10.15 – 10.30 Joseph A. Newman, Lorraine Hewitt, Cecilia Rodrigues, Alexandra Solovyova, Colin R. Harwood, and Richard J. Lewis (Newcastle University, Newcastle-upon-Tyne, U.K.)
- Unusual, dual endo- and exo-nuclease activity in the degradosome explained by crystal structure analysis of RNase J1
- 10.30 – 11.00 Coffee/Tea
Session IV; RNA biology of Bacillus; continued
Chair: Ulrike Mäder
11.00 – 11.15 Katharina Schäfer, Ulrike Mäder, Georg Homuth, and Thomas Wiegert (University of Bayreuth, Germany; Ernst-Moritz-Arndt-University Greifswald, Germany; and University of Applied Sciences, Zittau/Görlitz, Germany)
- Analysis of Rho-dependent termination of the Bacillus subtilis sigX-rsiX operon
11.15 – 11.30 Anne R. Karow, Regula Aregger, and Dagmar Klostermeier (University of Basel, Biozentrum, Switzerland; and University of Muenster, Germany
- Dissecting the mechanism of the DEAD box protein YxiN from Bacillus subtilis
11.30 – 11.45 Hermann Hämmerle, Branislav Večerek, Ivo Hofacker, and Udo Bläsi (Max F. Perutz Laboratories, University of Vienna, Austria; Czech Academy of Sciences, Prague, Czech Republic; and Institute for Theoretical Chemistry, University of Vienna, Austria)
- Identification of candidate Hfq targets in Bacillus subtilis
11.45 – 12.00 Sandra Wiegand, Sascha Dietrich, and Heiko Liesegang (Georg-August-University of Göttingen, Germany)
- Regulatory elements of Bacillus licheniformis DSM 13
Session V: Tools Chair: Ulrike Mäder (continued) 12.00 – 12.15 Jan Muntel, Vincent Fromion, Michael Hecker and Dörte Becher (Ernst-Moritz-Arndt-University of Greifswald, Germany; and INRA, Jouy-en-Josas, France)
- New approach for global absolute protein quantification of B. subtilis
12.15 – 12.30 Valérie Leclère, Maude Pupin; Walaa Hussein, Max Béchet, Frédérique Gancel, Marlène Chollet, Ségolène Caboche, and Philippe Jacques (Université de Lille Nord de France, Sciences et Technologies, Villeneuve d'Ascq, France)
- Bioinformatics tools to decrypt non-ribosomal peptide diversity in bacilli
12.30 – 14.00 Lunch (+ BACIP meeting)
Session VI: Regulation and Metabolism Chair: Sabine Brantl 14.00 – 14.15 Airat Kayumov, Annette Heinrich, Kseniya Fedorova, Olga Ilinskaya, and Karl Forchhammer (Kazan State University of Architecture and Engineering, Kazan, Russia; and Eberhard-Karls-Universität Tübingen, Germany)
- Interaction of the general transcription factor TnrA with the PII-like protein GlnK and glutamine synthetase in Bacillus subtilis
14.15 – 14.30 Jens Landmann, Ricarda Busse, Jörg Stülke, and Boris Görke (Georg-August-University of Göttingen, Germany)
- Regulation of a glycolytic bypass by Crh, the homolog of the phospho-carrier protein HPr in Bacillus subtilis
14.30 – 14.45 Alexander K.W. Elsholz, Dan Oertel, Katrin Gronau, Dörte Becher, Kürsad Turgay, Michael Hecker, and Ulf Gerth (Ernst-Moritz-Arndt-University of Greifswald, Germany; and Freie Universität Berlin, Germany)
- Arginine phosphorylation modulates ClpC activity in Bacillus subtilis
14.45 – 15.00 Ines Gruner, Anika March, Claudia Frädrich, and Elisabeth Härtig (Technical University of Braunschweig, Germany)
- Regulation of anaerobic adaptation of Bacillus subtilis
15.00 – 15.15 Marcus Miethke, Florian Peuckert, and Mohamed A. Marahiel (Philipps University of Marburg, Germany)
- Ferric siderophore uptake and intracellular iron release in Bacillus subtilis and Bacillus halodurans
15.15 – 15.30 S. Graf, and G. Unden (Universität Mainz, Germany)
- The fumarate sensor DcuS of Geobacillus kaustophilus
15.30 – 15.45 Ken-ichi Yoshida (Kobe University, Kobe, Japan)
- Natural interconversion of inositol stereoisomers in bacteria?
15.45 – 16.15 Coffee/Tea
Session VII: Cell wall and Sporulation Chair: Dörte Becher 16.15 – 16.30 Eric Botella, Sebastian Hübner, and Kevin M Devine (Trinity College Dublin, Ireland)
- Cell envelope gene expression in phosphate limited Bacillus subtilis cells
16.30 – 16.45 Robyn T. Eijlander, and Oscar P. Kuipers (TI Food and Nutrition, Wageningen, the Netherlands; and University of Groningen, the Netherlands)
- Studying Bacillus cereus sporulation and germination at the single cell level
16.45 – 17.00 Anthony J. Wilkinson (University of York, UK)
- Structural and interaction studies of an intercellular zipper mediating engulfment during sporulation in B. subtilis
Session VIII: Gram-positive pathogens Chair: Imrich Barak 17.00 – 17.15 Simen M. Kristoffersen, Nicolas J. Tourasse, Timothy D. Read, Brian Desany, Anne-Brit Kolstø, and Ole Andreas Økstad (School of Pharmacy, University of Oslo, Norway; Emory University School of Medicine, Atlanta, GA, USA; and Life Sciences, A Roche Company, Branford, USA)
- Eighteen interspersed DNA repeat elements in the Bacillus cereus group promote genome dynamics and plasticity, and may confer global and local effects on neighbour gene transcription
17.15 – 17.30 Susanne Pohl, Wang Yung Tu, Nigel Robinson, Kevin Waldron, and Colin Harwood (Newcastle University, Newcastle upon Tyne, United Kingdom)
- The superoxide oxidative stress response of Bacillus anthracis
17.30 – 17.45 Vahid Farshchi Andisi, Anne de Jong, Oscar P. Kuipers, and Jetta J.E. Bijlsma (UMCG-University of Groningen, the Netherlands; and University of Groningen, the Netherlands)
- Identification of a Streptococcus pneumoniae protein involved in resistance to oxidative stress
17.45 – 18.00 Annette Dreisbach, Magdalena M. van der Kooi-Pol, Andreas Otto, Katrin Gronau, Hendrik P. J. Bonarius, Hans Westra, Herman Groen, Dörte Becher, Michael Hecker, and Jan Maarten van Dijl (UMCG-University of Groningen, the Netherlands; Ernst-Moritz-Arndt-Universität, Greifswald, Germany; and IQ Therapeutics, Groningen, the Netherlands)
- Profiling of global interactions between human serum proteins and the Staphylococcus aureus cell surface