Difference between revisions of "SpoIIID"

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(Extended information on the protein)
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=== Database entries ===
 
=== Database entries ===

Revision as of 12:30, 10 August 2011

  • Description: transcriptional regulator of sigma-E- and sigma-K-dependent genes

Gene name spoIIID
Synonyms
Essential no
Product transcriptional regulator
Function regulation of mother cell gene expression
Metabolic function and regulation of this protein in SubtiPathways:
Asp, Asn, Cell wall
MW, pI 10 kDa, 9.496
Gene length, protein length 279 bp, 93 aa
Immediate neighbours mbl, usd
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SpoIIID context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

transcription factors and their control, sporulation proteins

This gene is a member of the following regulons

SigE regulon

The SpoIIID regulon

The gene

Basic information

  • Locus tag: BSU36420

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: binds its DNA targets as a monomeric protein (possible due to the two DNA-binding motifs) PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: two DNA-binding regions: HTH at the N-terminus and a basic region near the C-terminus PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References