Difference between revisions of "YvbW"
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | + | {{SubtiWiki regulon|[[T-box]]}} | |
=The gene= | =The gene= | ||
| Line 52: | Line 52: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| − | * '''Protein family:''' | + | * '''Protein family:''' amino acid-polyamine-organocation transporter family |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| Line 101: | Line 99: | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** induced by leucine limitation ([[T-box]]) {{PubMed|18625071}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[T-box]]: [[RNA switch]], transcriptional antitermination {{PubMed|18625071}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 125: | Line 125: | ||
=References= | =References= | ||
| − | + | <pubmed> 18625071</pubmed> | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:36, 27 July 2011
- Description: similar to amino acid permease
| Gene name | yvbW |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 49 kDa, 9.837 |
| Gene length, protein length | 1341 bp, 447 aa |
| Immediate neighbours | yvbV, yvbX |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34010
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: amino acid-polyamine-organocation transporter family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O32257
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- T-box: RNA switch, transcriptional antitermination PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Michiel Wels, Tom Groot Kormelink, Michiel Kleerebezem, Roland J Siezen, Christof Francke
An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters.
BMC Genomics: 2008, 9;330
[PubMed:18625071]
[WorldCat.org]
[DOI]
(I e)
