Difference between revisions of "YngJ"

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(Database entries)
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=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3OWA 3OWA] (from ''B. anthracis'', 37% identity, 54% similarity)
  
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/O34421 O34421]
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/O34421 O34421]

Revision as of 18:03, 6 December 2010

  • Description: 3-methylbutanoyl-CoA dehydrogenase

Gene name yngJ
Synonyms
Essential no
Product 3-methylbutanoyl-CoA dehydrogenase
Function mother cell metabolism, leucine utilization
MW, pI 40 kDa, 5.794
Gene length, protein length 1140 bp, 380 aa
Immediate neighbours yngI, ynzE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YngJ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU18260

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

Categories containing this gene/protein

utilization of amino acids, sporulation proteins

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 3-methylbutanoyl-CoA --> 3-methylbut-2-enoyl-CoA PubMed
  • Protein family:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 3OWA (from B. anthracis, 37% identity, 54% similarity)
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References