Difference between revisions of "QdoR"
(→Expression and regulation) |
|||
| Line 94: | Line 94: | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| − | * | + | ** induced by flavonoids such as quercetin ([[YxaF]], [[LmrA]]) {{PubMed|17483215}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | ** | + | ** [[LmrA]]: transcription repression {{PubMed|15317768}} |
| − | ** [[ | + | ** [[YxaF]]: transcription repression {{PubMed|17483215}} |
* '''Additional information:''' | * '''Additional information:''' | ||
Revision as of 18:19, 13 February 2010
| Gene name | yxaF |
| Synonyms | |
| Essential | no |
| Product | transcriptional regulator |
| Function | control of quercetin utilization |
| MW, pI | 20 kDa, 6.111 |
| Gene length, protein length | 573 bp, 191 aa |
| Immediate neighbours | qdoI, yxnA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU39990
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): LmrA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: flavonoids such as quercetin act as molecular inducers and result in release from DNA targets PubMed
- Interactions:
- Localization:
Database entries
- Structure: 1SGM
- UniProt: P42105
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yxaF PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
