Difference between revisions of "DnaD"
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| − | * '''Description:''' initiation of chromosome replication <br/><br/> | + | * '''Description:''' initiation of chromosome replication, part of the [[replisome]] <br/><br/> |
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' [[DnaD]]-[[PriA]] {{PubMed|11585815}}, [[DnaD]]-[[DnaA]] {{PubMed|11222620}}, [[DnaD]]-[[DnaB]] {{PubMed|15186423,19707554}} | + | * '''Interactions:''' [[DnaD]]-[[PriA]] {{PubMed|11585815}}, [[DnaD]]-[[DnaA]] {{PubMed|11222620}}, [[DnaD]]-[[DnaB]] {{PubMed|15186423,19707554}}, part of the [[replisome]]: [[PolC]]-[[HolA]]-[[HolB]]-[[DnaX]]-[[DnaN]]-[[DnaG]]-[[DnaC]]-[[DnaI]]-[[DnaD]]-[[SsbA]]-[[DnaE]]-[[PriA]]-[[DnaB]] {{PubMed|20122408}} |
* '''Localization:''' Membrane-proximal (Spotty) [http://www.ncbi.nlm.nih.gov/sites/entrez/16479537 PubMed] | * '''Localization:''' Membrane-proximal (Spotty) [http://www.ncbi.nlm.nih.gov/sites/entrez/16479537 PubMed] | ||
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=References= | =References= | ||
| − | <pubmed> 19707554,15686560,15186423,11585815,,16479537, 11222620 19968790 11679082 </pubmed> | + | <pubmed> 19707554,15686560,15186423,11585815, 20122408,16479537, 11222620 19968790 11679082 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 09:25, 4 February 2010
- Description: initiation of chromosome replication, part of the replisome
| Gene name | dnaD |
| Synonyms | |
| Essential | yes PubMed |
| Product | initiation of chromosome replication |
| Function | DNA replication |
| MW, pI | 27 kDa, 7.174 |
| Gene length, protein length | 696 bp, 232 aa |
| Immediate neighbours | nth, asnS |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU22350
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: DNA polymerase type-Y family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions: DnaD-PriA PubMed, DnaD-DnaA PubMed, DnaD-DnaB PubMed, part of the replisome: PolC-HolA-HolB-DnaX-DnaN-DnaG-DnaC-DnaI-DnaD-SsbA-DnaE-PriA-DnaB PubMed
- Localization: Membrane-proximal (Spotty) PubMed
Database entries
- Structure: 2C79 (N-terminal domain)
- UniProt: P39787
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
