Difference between revisions of "RibA"
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=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=2BZ0 2BZ0] (from ''E. coli'', 54% identity, 69% similarity to the C-terminal domain) {{PubMed|16115872}} |
* '''UniProt:''' [http://www.uniprot.org/uniprot/P17620 P17620] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P17620 P17620] | ||
| Line 118: | Line 118: | ||
=References= | =References= | ||
| − | <pubmed> 19583770 12456892,15808508,, 8159171, 7934829, 7934830</pubmed> | + | <pubmed> 19583770 12456892,15808508,, 8159171, 7934829, 7934830 16115872 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:48, 3 February 2010
- Description: GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone 4-phosphate synthase
| Gene name | ribA |
| Synonyms | |
| Essential | no |
| Product | GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone 4-phosphate synthase |
| Function | riboflavin biosynthesis |
| MW, pI | 43 kDa, 5.582 |
| Gene length, protein length | 1194 bp, 398 aa |
| Immediate neighbours | ribH, ribE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU23260
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-ribulose 5-phosphate = formate + L-3,4-dihydroxybutan-2-one 4-phosphate (according to Swiss-Prot)
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- UniProt: P17620
- KEGG entry: [3]
Additional information
Expression and regulation
- Regulatory mechanism: FMN-box: riboswitch, mediates termination/ antitermination control of the operon, in the absence of FMN: antitermination, in the presence of FMN: termination PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
