Difference between revisions of "RpsO"
| Line 78: | Line 78: | ||
=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1A32 1A32] (Geobacillus stearothermophilus) | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1A32 1A32] (''Geobacillus stearothermophilus'') |
* '''UniProt:''' [http://www.uniprot.org/uniprot/P21473 P21473] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P21473 P21473] | ||
| Line 99: | Line 99: | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' the mRNA is processed by RNases J1 and J2 {{PubMed| 19633085}} | + | * '''Additional information:''' the mRNA is processed by RNases [[rnjA|J1]] and [[rnjB|J2]] {{PubMed| 19633085}} |
=Biological materials = | =Biological materials = | ||
Revision as of 18:37, 3 November 2009
- Description: ribosomal protein
| Gene name | rpsO |
| Synonyms | |
| Essential | yes PubMed |
| Product | ribosomal protein S15 (BS18) |
| Function | translation |
| MW, pI | 10 kDa, 10.975 |
| Gene length, protein length | 267 bp, 89 aa |
| Immediate neighbours | ribC, pnpA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU16680
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ribosomal protein S15P family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 1A32 (Geobacillus stearothermophilus)
- UniProt: P21473
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon: rpsO 19633085 PubMed
- Sigma factor:
- Regulatory mechanism:
- Additional information: the mRNA is processed by RNases J1 and J2 19633085 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Matthew A Lauber, William E Running, James P Reilly
B. subtilis ribosomal proteins: structural homology and post-translational modifications.
J Proteome Res: 2009, 8(9);4193-206
[PubMed:19653700]
[WorldCat.org]
[DOI]
(P p)
Shiyi Yao, David H Bechhofer
Processing and stability of inducibly expressed rpsO mRNA derivatives in Bacillus subtilis.
J Bacteriol: 2009, 191(18);5680-9
[PubMed:19633085]
[WorldCat.org]
[DOI]
(I p)
