Difference between revisions of "DacB"
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[dacB]]-[[spmA]]-[[spmB]]'' | + | * '''Operon:''' ''[[dacB]]-[[spmA]]-[[spmB]]'' {{PubMed|7642500}} |
| − | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,7528199}} |
| − | * '''Regulation:''' | + | * '''Regulation:''' |
| + | ** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|15699190,7528199}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 117: | Line 118: | ||
=References= | =References= | ||
| − | + | <pubmed>10498740,9864321,1548223,7642500,14731276,19542328 ,7528199 15699190 </pubmed> | |
| − | <pubmed>10498740,9864321,1548223,7642500,14731276,19542328 , </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 18:00, 6 November 2009
- Description: penicillin-binding protein 5, D-alanyl-D-alanine carboxypeptidase
| Gene name | dacB |
| Synonyms | |
| Essential | no |
| Product | penicillin-binding protein 5, D-alanyl-D-alanine carboxypeptidase |
| Function | carboxypeptidase |
| MW, pI | 42 kDa, 9.725 |
| Gene length, protein length | 1146 bp, 382 aa |
| Immediate neighbours | spmA, ypuI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU23190
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Preferential cleavage: (Ac)(2)-L-Lys-D-Ala-|-D-Ala (according to Swiss-Prot)
- Protein family: peptidase S11 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P35150
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
