Difference between revisions of "LcfA"
(→Expression and regulation) |
|||
Line 92: | Line 92: | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
− | * '''Regulation:''' repressed by glucose ([[CcpA]]) | + | * '''Regulation:''' |
− | + | ** repressed by glucose ([[CcpA]]) | |
+ | ** induced by long chain acyl-CoA (C14 ... C20) ([[FadR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17189250 PubMed] | ||
− | * '''Regulatory mechanism:''' [[CcpA]]: transcription repression | + | * '''Regulatory mechanism:''' |
+ | ** [[CcpA]]: transcription repression | ||
** [[FadR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/17189250 PubMed] | ** [[FadR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/17189250 PubMed] | ||
− | + | * '''Additional information:''' | |
− | * '''Additional information:''' | ||
=Biological materials = | =Biological materials = |
Revision as of 21:28, 15 December 2009
- Description: long chain acyl-CoA synthetase
Gene name | lcfA |
Synonyms | |
Essential | no |
Product | long chain acyl-CoA synthetase |
Function | fatty acid degradation |
MW, pI | 62 kDa, 6.119 |
Gene length, protein length | 1680 bp, 560 aa |
Immediate neighbours | fadR, yshE |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag: BSU28560
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA (according to Swiss-Prot)
- Protein family: ATP-dependent AMP-binding enzyme family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P94547
- KEGG entry: [3]
- E.C. number: 6.2.1.3
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References