Difference between revisions of "Template"
(New page: * '''Synonyms:''' * '''Description:''' =The gene= == Basic information == * '''Coordinates:''' * '''Gene length:''' == Database entries == * '''DBTBS entry:''' [http://dbtbs.hgc.j...) |
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| − | * '''Synonyms:''' | + | * '''Description:''' write here <br/><br/> |
| + | |||
| + | {| align="right" border="1" cellpadding="2" | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"|'''Gene name''' | ||
| + | |''genE'' | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''Essential''' || write here | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''Product''' || write here | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"|'''Function''' || write here | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || xx,x kDa, y.yy | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || aaa bp, bbb amino acids | ||
| + | |- | ||
| + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[genA]]'', ''[[genB]]'' | ||
| + | |- | ||
| + | |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt Gene sequence (+200bp) ]''' | ||
| + | |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_protein.txt Protein sequence]''' | ||
| + | |- | ||
| + | |colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]] | ||
| + | |- | ||
| + | |} | ||
| + | |||
| + | __TOC__ | ||
| + | |||
| + | <br/><br/> | ||
| − | |||
| − | |||
=The gene= | =The gene= | ||
| − | == Basic information == | + | === Basic information === |
| + | |||
| + | * '''Locus tag:''' | ||
| − | + | ===Phenotypes of a mutant === | |
| − | + | === Database entries === | |
| − | + | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rocG.html] | |
| − | * ''' | + | * '''SubtiList entry:''' |
| − | + | === Additional information=== | |
=The protein= | =The protein= | ||
| − | == Basic information/ Evolution == | + | === Basic information/ Evolution === |
* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| Line 27: | Line 57: | ||
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| − | == | + | === Extended information on the protein === |
| + | |||
| + | * '''Kinetic information:''' | ||
| − | * ''' | + | * '''Domains:''' |
| − | * ''' | + | * '''Modification:''' |
| − | * ''' | + | * '''Cofactor(s):''' |
| − | + | * '''Effectors of protein activity:''' | |
| − | * ''' | + | * '''Interactions:''' |
| − | * ''' | + | * '''Localization:''' |
| − | + | === Database entries === | |
| − | * ''' | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=abcd abcd] |
| + | |||
| + | * '''Swiss prot entry:''' | ||
| + | |||
| + | * '''KEGG entry:''' | ||
| − | * ''' | + | * '''E.C. number:''' |
| − | + | === Additional information=== | |
| − | =Expression and | + | =Expression and regulation= |
* '''Operon:''' | * '''Operon:''' | ||
| Line 59: | Line 95: | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | =Biological | + | * '''Additional information:''' |
| + | |||
| + | =Biological materials = | ||
* '''Mutant:''' | * '''Mutant:''' | ||
| Line 69: | Line 107: | ||
* '''GFP fusion:''' | * '''GFP fusion:''' | ||
| − | * ''' | + | * '''two-hybrid system:''' |
| − | + | * '''Antibody:''' | |
| + | =Labs working on this gene/protein= | ||
| − | = | + | =Your additional remarks= |
| − | + | =References= | |
| + | <pubmed> 19422832 </pubmed> | ||
| − | = | + | [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=DetailsSearch&term=subtilis+codY&log$=activity search PubMed] |
Latest revision as of 19:47, 15 June 2009
- Description: write here
| Gene name | genE |
| Synonyms | |
| Essential | write here |
| Product | write here |
| Function | write here |
| MW, pI | xx,x kDa, y.yy |
| Gene length, protein length | aaa bp, bbb amino acids |
| Immediate neighbours | genA, genB |
| Gene sequence (+200bp) | Protein sequence |
| Genetic context File:GenE context.gif | |
Contents
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry:
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: abcd
- Swiss prot entry:
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Begoña Carrasco, Cristina Cañas, Gary J Sharples, Juan C Alonso, Silvia Ayora
The N-terminal region of the RecU holliday junction resolvase is essential for homologous recombination.
J Mol Biol: 2009, 390(1);1-9
[PubMed:19422832]
[WorldCat.org]
[DOI]
(I p)
