Difference between revisions of "MhqA"
| (4 intermediate revisions by 2 users not shown) | |||
| Line 21: | Line 21: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[steT]]'', ''[[ykcB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[steT]]'', ''[[ykcB]]'' | ||
|- | |- | ||
| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12870 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12870 DNA_with_flanks] |
|- | |- | ||
|- | |- | ||
| Line 28: | Line 28: | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
|- | |- | ||
| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mhqA_1353080_1354030_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:mhqA_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mhqA_1353080_1354030_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:mhqA_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU12870]] |
|- | |- | ||
|} | |} | ||
| Line 57: | Line 57: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU12870&redirect=T BSU12870] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/mhqA.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/mhqA.html] | ||
| Line 73: | Line 74: | ||
* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| − | * '''Protein family:''' extradiol ring-cleavage dioxygenase family (according to | + | * '''Protein family:''' extradiol ring-cleavage dioxygenase family (according to UniProt) |
* '''Paralogous protein(s):''' [[MhqE]], [[MhqO]] | * '''Paralogous protein(s):''' [[MhqE]], [[MhqO]] | ||
| Line 94: | Line 95: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU12870&redirect=T BSU12870] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3OAJ 3OAJ] ([[MhqO]], 34% identical residues) | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3OAJ 3OAJ] ([[MhqO]], 34% identical residues) | ||
| Line 120: | Line 122: | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| + | ** number of protein molecules per cell (minimal medium with glucose and ammonium): 183 {{PubMed|24696501}} | ||
=Biological materials = | =Biological materials = | ||
Latest revision as of 08:58, 25 June 2019
- Description: hydroquinone-specific dioxygenase, confers resistence to methyl-hydroxyquinone
| Gene name | mhqA |
| Synonyms | ykcA |
| Essential | no |
| Product | hydroquinone-specific dioxygenase |
| Function | resistence to methyl-hydroxyquinone |
| Gene expression levels in SubtiExpress: mhqA | |
| MW, pI | 35 kDa, 5.404 |
| Gene length, protein length | 948 bp, 316 aa |
| Immediate neighbours | steT, ykcB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
resistance against oxidative and electrophile stress
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU12870
Phenotypes of a mutant
Database entries
- BsubCyc: BSU12870
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: extradiol ring-cleavage dioxygenase family (according to UniProt)
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU12870
- UniProt: O34689
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: mhqA PubMed
- Additional information:
- number of protein molecules per cell (minimal medium with glucose and ammonium): 183 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
