Difference between revisions of "MhqE"
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to methyl hydroquinone and catechol | |style="background:#ABCDEF;" align="center"|'''Function''' || resistance to methyl hydroquinone and catechol | ||
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| + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU19570 mhqE] | ||
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 5.041 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 5.041 | ||
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 909 bp, 303 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 909 bp, 303 aa | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mhqD]]'', ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mhqD]]'', ''[[yoyD]]'' |
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19570 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19570 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19570 DNA_with_flanks] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:yodE_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yodE_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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| + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yodE_2129082_2129993_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:mhqE_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU19570]] | ||
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__TOC__ | __TOC__ | ||
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU19570&redirect=T BSU19570] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/mhqED.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/mhqED.html] | ||
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| − | * '''Protein family:''' | + | * '''Protein family:''' extradiol ring-cleavage dioxygenase family (according to UniProt) |
* '''Paralogous protein(s):''' [[MhqA]], [[MhqO]] | * '''Paralogous protein(s):''' [[MhqA]], [[MhqO]] | ||
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''[[SubtInteract|Interactions]]:''' |
| − | * '''Localization:''' cytoplasm (according to Swiss-Prot) | + | * '''[[Localization]]:''' cytoplasm (according to Swiss-Prot) |
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU19570&redirect=T BSU19570] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3OAJ 3OAJ] ([[MhqO]], 48% identical residues) | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3OAJ 3OAJ] ([[MhqO]], 48% identical residues) | ||
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* '''Operon:''' ''[[mhqE]]-[[mhqD]]'' {{PubMed|17725564}} | * '''Operon:''' ''[[mhqE]]-[[mhqD]]'' {{PubMed|17725564}} | ||
| − | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yodE_2129082_2129993_-1 mhqE] {{PubMed|22383849}} |
| + | |||
| + | * '''Sigma factor:''' [[SigA]] {{PubMed|17725564}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
Latest revision as of 08:58, 25 June 2019
- Description: dioxygenase/glyoxalase
| Gene name | mhqE |
| Synonyms | yodE |
| Essential | no |
| Product | dioxygenase/glyoxalase |
| Function | resistance to methyl hydroquinone and catechol |
| Gene expression levels in SubtiExpress: mhqE | |
| MW, pI | 33 kDa, 5.041 |
| Gene length, protein length | 909 bp, 303 aa |
| Immediate neighbours | mhqD, yoyD |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
resistance against oxidative and electrophile stress
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU19570
Phenotypes of a mutant
Database entries
- BsubCyc: BSU19570
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: extradiol ring-cleavage dioxygenase family (according to UniProt)
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU19570
- UniProt: O34543
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Stefanie Töwe, Montira Leelakriangsak, Kazuo Kobayashi, Nguyen Van Duy, Michael Hecker, Peter Zuber, Haike Antelmann
The MarR-type repressor MhqR (YkvE) regulates multiple dioxygenases/glyoxalases and an azoreductase which confer resistance to 2-methylhydroquinone and catechol in Bacillus subtilis.
Mol Microbiol: 2007, 66(1);40-54
[PubMed:17725564]
[WorldCat.org]
[DOI]
(P p)
Van Duy Nguyen, Carmen Wolf, Ulrike Mäder, Michael Lalk, Peter Langer, Ulrike Lindequist, Michael Hecker, Haike Antelmann
Transcriptome and proteome analyses in response to 2-methylhydroquinone and 6-brom-2-vinyl-chroman-4-on reveal different degradation systems involved in the catabolism of aromatic compounds in Bacillus subtilis.
Proteomics: 2007, 7(9);1391-408
[PubMed:17407181]
[WorldCat.org]
[DOI]
(P p)
