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− | * '''Description:''' alpha-L-arabinofuranosidase <br/><br/>
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− | {| align="right" border="1" cellpadding="2"
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− | |style="background:#ABCDEF;" align="center"|'''Gene name'''
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− | |''abf2''
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− | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''xsa ''
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− | |style="background:#ABCDEF;" align="center"| '''Essential''' || no
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− | |style="background:#ABCDEF;" align="center"| '''Product''' || alpha-L-arabinofuranosidase
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− | |style="background:#ABCDEF;" align="center"|'''Function''' || arabinan degradation
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− | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 56 kDa, 5.329
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− | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1485 bp, 495 aa
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− | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trxA]]'', ''[[etfA]]''
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− | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB14811]+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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− | |colspan="2" | '''Genetic context''' <br/> [[Image:xsa_context.gif]]
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− | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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− | |}
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− | __TOC__
| + | [[File:Example.jpg]] |
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− | <br/><br/><br/><br/>
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− | =The gene=
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− | === Basic information ===
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− | * '''Locus tag:''' BSU28510
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− | ===Phenotypes of a mutant ===
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− | === Database entries ===
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− | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/xsa.html]
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− | * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11985]
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− | === Additional information===
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− | = Categories containing this gene/protein =
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− | {{SubtiWiki category|[[utilization of specific carbon sources]]}}
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− | =The protein=
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− | === Basic information/ Evolution ===
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− | * '''Catalyzed reaction/ biological activity:''' Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides (according to Swiss-Prot)
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− | * '''Protein family:''' glycosyl hydrolase 51 family (according to Swiss-Prot)
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− | * '''Paralogous protein(s):'''
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− | === Extended information on the protein ===
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− | * '''Kinetic information:'''
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− | * '''Domains:'''
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− | * '''Modification:'''
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− | * '''Cofactor(s):'''
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− | * '''Effectors of protein activity:'''
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− | * '''Interactions:'''
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− | * '''Localization:'''
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− | === Database entries ===
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− | * '''Structure:'''
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− | * '''UniProt:''' [http://www.uniprot.org/uniprot/P94552 P94552]
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− | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU28510]
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− | * '''E.C. number:''' [http://www.expasy.org/enzyme/3.2.1.55 3.2.1.55]
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− | === Additional information===
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− | =Expression and regulation=
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− | * '''Operon:''' ''abf2'' [http://www.ncbi.nlm.nih.gov/sites/entrez/14973026 PubMed]
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− | * '''[[Sigma factor]]:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/14973026 PubMed]
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− | * '''Regulation:'''
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− | ** induced by arabinose ([[AraR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/14973026 PubMed]
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− | * '''Regulatory mechanism:'''
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− | ** [[AraR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/14973026 PubMed]
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− | * '''Additional information:'''
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− | =Biological materials =
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− | * '''Mutant:'''
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− | * '''Expression vector:'''
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− | * '''lacZ fusion:'''
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− | * '''GFP fusion:'''
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− | * '''two-hybrid system:'''
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− | * '''Antibody:'''
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− | =Labs working on this gene/protein=
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− | =Your additional remarks=
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− | =References=
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− | <pubmed>14973026,18757805,,14973026, </pubmed>
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− | [[Category:Protein-coding genes]]
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