Difference between revisions of "SigM regulon"
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* The [[SigM]] regulon is induced by cell wall-active antibiotics like vancomycin and bacitracin, as well as a variety of other stresses | * The [[SigM]] regulon is induced by cell wall-active antibiotics like vancomycin and bacitracin, as well as a variety of other stresses | ||
| + | * Expression of the [[SigM]] regulon in increased in ''[[ugtP]]'' mutants {{PubMed|22362028}} | ||
= Genes in this [[regulon]] = | = Genes in this [[regulon]] = | ||
* ''[[abh]]'' | * ''[[abh]]'' | ||
| + | * ''[[amj]]'' | ||
* ''[[bcrC]]'' | * ''[[bcrC]]'' | ||
* ''[[coaX]]'' | * ''[[coaX]]'' | ||
| − | * ''[[ddl]]'' | + | * ''[[ddl]]-[[murF]]'' |
* ''[[disA]]'' | * ''[[disA]]'' | ||
| − | |||
* ''[[divIC]]'' | * ''[[divIC]]'' | ||
| − | * ''[[dltA]] | + | * ''[[dltA]]-[[dltB]]-[[dltC]]-[[dltD]]-[[dltE]]'' |
| − | |||
| − | |||
| − | |||
| − | |||
* ''[[fatR]]'' | * ''[[fatR]]'' | ||
* ''[[ftsH]]'' | * ''[[ftsH]]'' | ||
| Line 23: | Line 20: | ||
* ''[[ispD]]'' | * ''[[ispD]]'' | ||
* ''[[metA]]'' | * ''[[metA]]'' | ||
| − | * ''[[ | + | * ''[[radC]]-[[mreB]]-[[mreC]]-[[mreD]]-[[minC]]-[[minD]]'' |
| − | + | * ''[[murB]]-[[divIB]]-[[ylxX]]-[[ylxW]]-[[sbp]]'' | |
| − | |||
| − | |||
| − | |||
| − | * ''[[murB]] | ||
| − | |||
| − | |||
* ''[[pbpX]]'' | * ''[[pbpX]]'' | ||
| − | |||
* ''[[rapD]]'' | * ''[[rapD]]'' | ||
| − | * ''[[recU]]'' | + | * ''[[recU]]-[[ponA]]'' |
* ''[[rodA]]'' | * ''[[rodA]]'' | ||
| − | * ''[[ | + | * ''[[sasA]]'' |
* ''[[secDF]]'' | * ''[[secDF]]'' | ||
| − | * ''[[sigM]]'' | + | * ''[[sigM]]-[[yhdL]]-[[yhdK]]'' |
* ''[[spx]]'' | * ''[[spx]]'' | ||
* ''[[tagT]]'' | * ''[[tagT]]'' | ||
| + | * ''[[tagU]]'' | ||
* ''[[tilS]]'' | * ''[[tilS]]'' | ||
* ''[[ugtP]]'' | * ''[[ugtP]]'' | ||
* ''[[yacC]]'' | * ''[[yacC]]'' | ||
* ''[[yacL]]'' | * ''[[yacL]]'' | ||
| − | * ''[[yceC]] | + | * ''[[yceC]]-[[yceD]]-[[yceE]]-[[yceF]]'' |
| − | |||
| − | |||
| − | |||
* ''[[yceG]]'' | * ''[[yceG]]'' | ||
* ''[[yceH]]'' | * ''[[yceH]]'' | ||
* ''[[ycgQ]]'' | * ''[[ycgQ]]'' | ||
* ''[[ycgR]]'' | * ''[[ycgR]]'' | ||
| − | |||
* ''[[yebC]]'' | * ''[[yebC]]'' | ||
* ''[[yfnI]]'' | * ''[[yfnI]]'' | ||
| − | |||
| − | |||
* ''[[yjbC]]'' | * ''[[yjbC]]'' | ||
| − | |||
| − | |||
* ''[[yngC]]'' | * ''[[yngC]]'' | ||
* ''[[ypbG]]'' | * ''[[ypbG]]'' | ||
| Line 68: | Line 51: | ||
* ''[[yrhH]]'' | * ''[[yrhH]]'' | ||
* ''[[yrhJ]]'' | * ''[[yrhJ]]'' | ||
| − | * ''[[ytpA]] | + | * ''[[ytpA]]-[[ytpB]]'' |
| − | |||
| − | |||
* ''[[ywbN]]'' | * ''[[ywbN]]'' | ||
* ''[[ywbO]]'' | * ''[[ywbO]]'' | ||
| Line 76: | Line 57: | ||
= Important publications on the [[SigM]] [[regulon]] = | = Important publications on the [[SigM]] [[regulon]] = | ||
| − | + | <pubmed>18179421,17675383,17434969,22092710 22362028,26901131</pubmed> | |
| − | <pubmed>18179421,17675383,17434969,</pubmed> | ||
=Back to [[regulons]]= | =Back to [[regulons]]= | ||
Latest revision as of 13:18, 24 February 2016
| Regulator | |
- The SigM regulon is induced by cell wall-active antibiotics like vancomycin and bacitracin, as well as a variety of other stresses
- Expression of the SigM regulon in increased in ugtP mutants PubMed
Genes in this regulon
- abh
- amj
- bcrC
- coaX
- ddl-murF
- disA
- divIC
- dltA-dltB-dltC-dltD-dltE
- fatR
- ftsH
- hprT
- ispD
- metA
- radC-mreB-mreC-mreD-minC-minD
- murB-divIB-ylxX-ylxW-sbp
- pbpX
- rapD
- recU-ponA
- rodA
- sasA
- secDF
- sigM-yhdL-yhdK
- spx
- tagT
- tagU
- tilS
- ugtP
- yacC
- yacL
- yceC-yceD-yceE-yceF
- yceG
- yceH
- ycgQ
- ycgR
- yebC
- yfnI
- yjbC
- yngC
- ypbG
- ypuA
- ypuD
- yqjL
- yrhH
- yrhJ
- ytpA-ytpB
- ywbN
- ywbO
- ywnJ
Important publications on the SigM regulon
John D Helmann
Bacillus subtilis extracytoplasmic function (ECF) sigma factors and defense of the cell envelope.
Curr Opin Microbiol: 2016, 30;122-132
[PubMed:26901131]
[WorldCat.org]
[DOI]
(I p)
Satoshi Matsuoka, Minako Chiba, Yu Tanimura, Michihiro Hashimoto, Hiroshi Hara, Kouji Matsumoto
Abnormal morphology of Bacillus subtilis ugtP mutant cells lacking glucolipids.
Genes Genet Syst: 2011, 86(5);295-304
[PubMed:22362028]
[WorldCat.org]
[DOI]
(I p)
Tina Wecke, Tobias Bauer, Henning Harth, Ulrike Mäder, Thorsten Mascher
The rhamnolipid stress response of Bacillus subtilis.
FEMS Microbiol Lett: 2011, 323(2);113-23
[PubMed:22092710]
[WorldCat.org]
[DOI]
(I p)
Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421]
[WorldCat.org]
[DOI]
(P p)
Thorsten Mascher, Anna-Barbara Hachmann, John D Helmann
Regulatory overlap and functional redundancy among Bacillus subtilis extracytoplasmic function sigma factors.
J Bacteriol: 2007, 189(19);6919-27
[PubMed:17675383]
[WorldCat.org]
[DOI]
(P p)
Adrian J Jervis, Penny D Thackray, Chris W Houston, Malcolm J Horsburgh, Anne Moir
SigM-responsive genes of Bacillus subtilis and their promoters.
J Bacteriol: 2007, 189(12);4534-8
[PubMed:17434969]
[WorldCat.org]
[DOI]
(P p)
