Difference between revisions of "SigM regulon"
(→Genes in this regulon) |
|||
| (19 intermediate revisions by 2 users not shown) | |||
| Line 2: | Line 2: | ||
Regulator=[[SigM]] | Regulator=[[SigM]] | ||
}} | }} | ||
| + | |||
| + | * The [[SigM]] regulon is induced by cell wall-active antibiotics like vancomycin and bacitracin, as well as a variety of other stresses | ||
| + | * Expression of the [[SigM]] regulon in increased in ''[[ugtP]]'' mutants {{PubMed|22362028}} | ||
= Genes in this [[regulon]] = | = Genes in this [[regulon]] = | ||
* ''[[abh]]'' | * ''[[abh]]'' | ||
| + | * ''[[amj]]'' | ||
* ''[[bcrC]]'' | * ''[[bcrC]]'' | ||
| − | * ''[[ddl]]'' | + | * ''[[coaX]]'' |
| + | * ''[[ddl]]-[[murF]]'' | ||
* ''[[disA]]'' | * ''[[disA]]'' | ||
| − | |||
* ''[[divIC]]'' | * ''[[divIC]]'' | ||
| + | * ''[[dltA]]-[[dltB]]-[[dltC]]-[[dltD]]-[[dltE]]'' | ||
* ''[[fatR]]'' | * ''[[fatR]]'' | ||
| + | * ''[[ftsH]]'' | ||
| + | * ''[[hprT]]'' | ||
* ''[[ispD]]'' | * ''[[ispD]]'' | ||
| − | * ''[[ | + | * ''[[metA]]'' |
| − | * ''[[ | + | * ''[[radC]]-[[mreB]]-[[mreC]]-[[mreD]]-[[minC]]-[[minD]]'' |
| − | * ''[[ | + | * ''[[murB]]-[[divIB]]-[[ylxX]]-[[ylxW]]-[[sbp]]'' |
| − | * ''[[ | + | * ''[[pbpX]]'' |
| − | * ''[[ | + | * ''[[rapD]]'' |
| − | * ''[[recU]]'' | + | * ''[[recU]]-[[ponA]]'' |
* ''[[rodA]]'' | * ''[[rodA]]'' | ||
| − | * ''[[ | + | * ''[[sasA]]'' |
| − | * ''[[sigM]]'' | + | * ''[[secDF]]'' |
| + | * ''[[sigM]]-[[yhdL]]-[[yhdK]]'' | ||
* ''[[spx]]'' | * ''[[spx]]'' | ||
| − | * ''[[ | + | * ''[[tagT]]'' |
| + | * ''[[tagU]]'' | ||
| + | * ''[[tilS]]'' | ||
| + | * ''[[ugtP]]'' | ||
| + | * ''[[yacC]]'' | ||
* ''[[yacL]]'' | * ''[[yacL]]'' | ||
| + | * ''[[yceC]]-[[yceD]]-[[yceE]]-[[yceF]]'' | ||
| + | * ''[[yceG]]'' | ||
| + | * ''[[yceH]]'' | ||
* ''[[ycgQ]]'' | * ''[[ycgQ]]'' | ||
* ''[[ycgR]]'' | * ''[[ycgR]]'' | ||
| − | |||
* ''[[yebC]]'' | * ''[[yebC]]'' | ||
* ''[[yfnI]]'' | * ''[[yfnI]]'' | ||
| − | |||
| − | |||
* ''[[yjbC]]'' | * ''[[yjbC]]'' | ||
| − | |||
| − | |||
* ''[[yngC]]'' | * ''[[yngC]]'' | ||
* ''[[ypbG]]'' | * ''[[ypbG]]'' | ||
| Line 39: | Line 49: | ||
* ''[[ypuD]]'' | * ''[[ypuD]]'' | ||
* ''[[yqjL]]'' | * ''[[yqjL]]'' | ||
| − | * ''[[ | + | * ''[[yrhH]]'' |
* ''[[yrhJ]]'' | * ''[[yrhJ]]'' | ||
| − | * ''[[ytpA]]'' | + | * ''[[ytpA]]-[[ytpB]]'' |
| − | * ''[[ | + | * ''[[ywbN]]'' |
| − | * ''[[ | + | * ''[[ywbO]]'' |
| + | * ''[[ywnJ]]'' | ||
| + | |||
= Important publications on the [[SigM]] [[regulon]] = | = Important publications on the [[SigM]] [[regulon]] = | ||
| − | <pubmed>18179421,17675383,17434969,</pubmed> | + | <pubmed>18179421,17675383,17434969,22092710 22362028,26901131</pubmed> |
=Back to [[regulons]]= | =Back to [[regulons]]= | ||
Latest revision as of 13:18, 24 February 2016
| Regulator | |
- The SigM regulon is induced by cell wall-active antibiotics like vancomycin and bacitracin, as well as a variety of other stresses
- Expression of the SigM regulon in increased in ugtP mutants PubMed
Genes in this regulon
- abh
- amj
- bcrC
- coaX
- ddl-murF
- disA
- divIC
- dltA-dltB-dltC-dltD-dltE
- fatR
- ftsH
- hprT
- ispD
- metA
- radC-mreB-mreC-mreD-minC-minD
- murB-divIB-ylxX-ylxW-sbp
- pbpX
- rapD
- recU-ponA
- rodA
- sasA
- secDF
- sigM-yhdL-yhdK
- spx
- tagT
- tagU
- tilS
- ugtP
- yacC
- yacL
- yceC-yceD-yceE-yceF
- yceG
- yceH
- ycgQ
- ycgR
- yebC
- yfnI
- yjbC
- yngC
- ypbG
- ypuA
- ypuD
- yqjL
- yrhH
- yrhJ
- ytpA-ytpB
- ywbN
- ywbO
- ywnJ
Important publications on the SigM regulon
John D Helmann
Bacillus subtilis extracytoplasmic function (ECF) sigma factors and defense of the cell envelope.
Curr Opin Microbiol: 2016, 30;122-132
[PubMed:26901131]
[WorldCat.org]
[DOI]
(I p)
Satoshi Matsuoka, Minako Chiba, Yu Tanimura, Michihiro Hashimoto, Hiroshi Hara, Kouji Matsumoto
Abnormal morphology of Bacillus subtilis ugtP mutant cells lacking glucolipids.
Genes Genet Syst: 2011, 86(5);295-304
[PubMed:22362028]
[WorldCat.org]
[DOI]
(I p)
Tina Wecke, Tobias Bauer, Henning Harth, Ulrike Mäder, Thorsten Mascher
The rhamnolipid stress response of Bacillus subtilis.
FEMS Microbiol Lett: 2011, 323(2);113-23
[PubMed:22092710]
[WorldCat.org]
[DOI]
(I p)
Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421]
[WorldCat.org]
[DOI]
(P p)
Thorsten Mascher, Anna-Barbara Hachmann, John D Helmann
Regulatory overlap and functional redundancy among Bacillus subtilis extracytoplasmic function sigma factors.
J Bacteriol: 2007, 189(19);6919-27
[PubMed:17675383]
[WorldCat.org]
[DOI]
(P p)
Adrian J Jervis, Penny D Thackray, Chris W Houston, Malcolm J Horsburgh, Anne Moir
SigM-responsive genes of Bacillus subtilis and their promoters.
J Bacteriol: 2007, 189(12);4534-8
[PubMed:17434969]
[WorldCat.org]
[DOI]
(P p)
