yodF

yodF
168

similar to amino acid permease

Locus
BSU_19580
Molecular weight
53.60 kDa
Isoelectric point
9.68
Protein length
496 aaSequenceBlast
Gene length
1491 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
yodF
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0591 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,130,377  2,131,867
The protein
Catalyzed reaction/ biological activity
in some database, the protein is annotated as being similar to proline permease, however, it is not involved in proline transport  PubMed
Protein family
sodium:solute symporter (SSF) (TC 2.A.21) family (according to UniProt)
Structure
O34745 (AlphaFold)
Paralogous protein(s)
YhjB
Localization
membrane PubMed
Expression and Regulation
Operons
Genes
yoyD-yodF
Description
PubMed
Regulation
expression during spore germination is strongly reduced under conditions of osmotic stress PubMed
Regulatory mechanism
TnrA: repression, PubMed, in tnrA regulon
Open in new tab

yoyD→yodF

2025-03-16 17:48:56

Jstuelk

109

b76413b76ac27cfae173804cefdd15b557151c91

D12707CF2D2A93BAD912E1DAA79938D08A9A2A7C

Biological materials
Mutant
MGNA-B437 (yodF::erm), available at the NBRP B. subtilis, Japan
GP1887 ΔyodF::kan, available in Jörg Stülke's lab PubMed
GP3569 ΔyodF::phleo, available in Jörg Stülke's lab
GP3570 ΔyodF::cat, available in Jörg Stülke's lab
BKE19580 (yodF::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AAGTGCAGTCAGATTCCCTT,  downstream forward: _UP4_TAAAAAAACCATACGCGGCA
BKK19580 (yodF::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AAGTGCAGTCAGATTCCCTT,  downstream forward: _UP4_TAAAAAAACCATACGCGGCA
References
Loading

7E86EB6FF86F2C4AE3FD11DB8CE8E71696D94B1B

Page visits: 5379

Time of last update: 2025-04-06 06:06:02

Author of last update: MBenda