Difference between revisions of "YuiC"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''yuiC'' | + | * '''Operon:''' ''yuiC'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yuiC_3298584_3299240_-1 yuiC] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yuiC_3298584_3299240_-1 yuiC] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigF]] {{PubMed|16497325}} | + | * '''[[Sigma factor]]:''' [[SigF]] {{PubMed|16497325}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** expressed early during sporulation in the forespore ([[SigF]]) {{PubMed|16497325}} | + | ** expressed early during [[sporulation]] in the forespore ([[SigF]]) {{PubMed|16497325}} |
** repressed during growth in the presence of branched chain amino acids ([[CodY]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/12618455 PubMed] | ** repressed during growth in the presence of branched chain amino acids ([[CodY]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/12618455 PubMed] | ||
Revision as of 15:00, 6 April 2015
- Description: sporulation protein
| Gene name | yuiC |
| Synonyms | |
| Essential | no |
| Product | sporulation protein |
| Function | unknown |
| Gene expression levels in SubtiExpress: yuiC | |
| MW, pI | 24 kDa, 8.588 |
| Gene length, protein length | 654 bp, 218 aa |
| Immediate neighbours | yuiD, yuiB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU32070
Phenotypes of a mutant
Database entries
- BsubCyc: BSU32070
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- BsubCyc: BSU32070
- Structure:
- UniProt: O32108
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yuiC PubMed
- Regulation:
- expressed early during sporulation in the forespore (SigF) PubMed
- repressed during growth in the presence of branched chain amino acids (CodY) PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325]
[WorldCat.org]
[DOI]
(P p)
Virginie Molle, Yoshiko Nakaura, Robert P Shivers, Hirotake Yamaguchi, Richard Losick, Yasutaro Fujita, Abraham L Sonenshein
Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis.
J Bacteriol: 2003, 185(6);1911-22
[PubMed:12618455]
[WorldCat.org]
[DOI]
(P p)
Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147]
[WorldCat.org]
[DOI]
(P p)
