Difference between revisions of "GerPF"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[gerPA]]-[[gerPB]]-[[gerPC]]-[[gerPD]]-[[gerPE]]-[[gerPF]]'' | + | * '''Operon:''' ''[[gerPA]]-[[gerPB]]-[[gerPC]]-[[gerPD]]-[[gerPE]]-[[gerPF]]'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gerPF_1148494_1148721_-1 gerPF] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gerPF_1148494_1148721_-1 gerPF] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigK]] {{PubMed|15699190}} | + | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** expressed during sporulation in the mother cell ([[SigK]]) {{PubMed|15699190,10715007}} | + | ** expressed during [[sporulation]] in the mother cell ([[SigK]]) {{PubMed|15699190,10715007}} |
| − | ** subject to negative regulation by GerE {{PubMed|10715007}} | + | ** subject to negative regulation by [[GerE]] {{PubMed|10715007}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
Revision as of 13:55, 6 April 2015
- Description: spore germination protein, facilitates access of nutrient germinants to their cognate germinant receptors in spores’ inner membrane
| Gene name | gerPF |
| Synonyms | yisC |
| Essential | no |
| Product | unknown |
| Function | germination |
| Gene expression levels in SubtiExpress: gerPF | |
| MW, pI | 7 kDa, 3.621 |
| Gene length, protein length | 225 bp, 75 aa |
| Immediate neighbours | hlpB, gerPE |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10670
Phenotypes of a mutant
Database entries
- BsubCyc: BSU10670
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: gerPA/gerPF family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU10670
- Structure:
- UniProt: O06716
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- expressed during sporulation in the mother cell (SigK) PubMed
- subject to negative regulation by GerE PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
J Behravan, H Chirakkal, A Masson, A Moir
Mutations in the gerP locus of Bacillus subtilis and Bacillus cereus affect access of germinants to their targets in spores.
J Bacteriol: 2000, 182(7);1987-94
[PubMed:10715007]
[WorldCat.org]
[DOI]
(P p)
