Difference between revisions of "Pseudogenes"
| (10 intermediate revisions by 4 users not shown) | |||
| Line 1: | Line 1: | ||
| + | '''These genes are fragmented in the genome of ''B. subtilis'' 168 and are therefore inactive''' | ||
| + | |||
| + | {{CategoryTree2 | ||
| + | |Parents= | ||
| + | * 6. [[Groups of genes]] | ||
| + | |Neighbours= | ||
| + | * 6.1. [[Essential genes]] | ||
| + | * 6.2. [[Membrane proteins]] | ||
| + | * 6.3. [[GTP-binding proteins]] | ||
| + | * 6.4. [[Phosphoproteins]] | ||
| + | * 6.5. [[Universally conserved proteins]] | ||
| + | * 6.6. [[Poorly characterized/ putative enzymes]] | ||
| + | * 6.7. [[Proteins of unknown function]] | ||
| + | * 6.8. [[Short peptides]] | ||
| + | * 6.9. [[ncRNA]] | ||
| + | * 6.10. [[Pseudogenes]] | ||
| + | |Related= | ||
| + | none | ||
| + | |}} | ||
| + | |||
| + | __TOC__ | ||
| + | |||
| + | <br/><br/> | ||
| + | |||
{| border="0" cellpadding="1" | {| border="0" cellpadding="1" | ||
|width="100"|<big>'''Genes'''</big> | |width="100"|<big>'''Genes'''</big> | ||
| Line 6: | Line 30: | ||
|- style="height:20px" | |- style="height:20px" | ||
| || | | || | ||
| + | |||
| + | | ''[[rpmGC]]'' || || | ||
|- | |- | ||
| ''[[yqbN/1]]'' || '''2677466..2677657''' || '''BSU26039''' | | ''[[yqbN/1]]'' || '''2677466..2677657''' || '''BSU26039''' | ||
| Line 50: | Line 76: | ||
|- | |- | ||
| ''[[ydzT/5]]'' || '''652713..653018''' || '''BSU06038''' || '''fifth part of the ydzT pseudogene''' | | ''[[ydzT/5]]'' || '''652713..653018''' || '''BSU06038''' || '''fifth part of the ydzT pseudogene''' | ||
| + | |- | ||
| + | | ''[[ydzV]]'' || '''654333..654692''' || '''BSU06049''' | ||
|- | |- | ||
| ''[[ydzW/1]]'' || '''657793..658062''' || '''BSU06073''' | | ''[[ydzW/1]]'' || '''657793..658062''' || '''BSU06073''' | ||
| Line 88: | Line 116: | ||
|- | |- | ||
| ''[[ypuC/2]]'' || '''2433878..2434165''' || '''BSU23330''' || '''second part of the ypuC pseudogene''' | | ''[[ypuC/2]]'' || '''2433878..2434165''' || '''BSU23330''' || '''second part of the ypuC pseudogene''' | ||
| + | |- | ||
| + | | ''[[yvzH]]'' || '''3666933..3667016''' || '''BSU35679''' | ||
| + | |- | ||
| + | | ''[[yvzI]]'' || '''3671416..3671622''' || '''BSU35698''' | ||
| + | |- | ||
| + | | ''[[yvzE]]'' || '''3672929..3673525''' || '''BSU35699''' | ||
| + | |- | ||
| + | | ''[[tuaA/1]]'' || '''3658259..3658408''' || '''BSU35609''' | ||
| + | |- | ||
| + | | ''[[tuaA/2]]'' || '''3658407..3658892''' || '''BSU35610''' | ||
|} | |} | ||
| + | =Back to [[categories]]= | ||
Latest revision as of 16:45, 6 February 2015
These genes are fragmented in the genome of B. subtilis 168 and are therefore inactive
| Parent category | |
| Neighbouring categories |
|
| Related categories |
none |
Contents
| Genes | Coordinates | BSU-Number | ||
| rpmGC | ||||
| yqbN/1 | 2677466..2677657 | BSU26039 | ||
| yqbN/2 | 2677657..2678094 | BSU26040 | second part of the yqbN pseudogene | |
| yrdD/1 | 2732389..2732547 | BSU26748 | ||
| yrdD/2 | 2732547..2732747 | BSU26749 | second part of the yrdD pseudogene | |
| yrdD/3 | 2732747..2732881 | BSU26750 | third part of the yrdD pseudogene | |
| yusY/1 | 3380704..3382212 | BSU32960 | ||
| yusY/2 | 3382209..3382499 | BSU32970 | second part of the yusY pseudogene | |
| swrAA/1 | 3621618..3621956 | BSU35230 | ||
| swrAA/2 | 3621931..3622047 | BSU35239 | second part of the swrAA pseudogene | |
| yxiT/1 | 4006987..4007415 | BSU39029 | ||
| yxiT/2 | 4007416..4007658 | BSU39030 | ||
| sfp/1 | 407460..407627 | BSU03569 | ||
| sfp/2 | 407638..408135 | BSU03570 | second part of the sfp pseudogene | |
| ydzS/1 | 581228..581329 | BSU05343 | ||
| ydzS/2 | 581341..581454 | BSU05344 | second part of the ydzS pseudogene | |
| ydhU/1 | 633923..634651 | BSU05890 | ||
| ydhU/2 | 634651..634776 | BSU05899 | second part of the ydhU pseudogene | |
| ydzT/1 | 651977..652084 | BSU06033 | ||
| ydzT/2 | 652087..652245 | BSU06034 | second part of the ydzT pseudogene | |
| ydzT/3 | 652290..652418 | BSU06036 | third part of the ydzT pseudogene | |
| ydzT/4 | 652511..652720 | BSU06037 | fourth part of the ydzT pseudogene | |
| ydzT/5 | 652713..653018 | BSU06038 | fifth part of the ydzT pseudogene | |
| ydzV | 654333..654692 | BSU06049 | ||
| ydzW/1 | 657793..658062 | BSU06073 | ||
| ydzW/2 | 658061..658189 | BSU06074 | second part of the ydzW pseudogene | |
| ydzW/3 | 658189..658605 | BSU06076 | third part of the ydzW pseudogene | |
| ydzW/4 | 658615..658758 | BSU06077 | fourth part of the ydzW pseudogene | |
| ydzW/5 | 658813..659010 | BSU06078 | fifth part of the ydzW pseudogene | |
| ydzW/6 | 659010..659129 | BSU06079 | sixth part of the ydzW pseudogene | |
| ydzW/7 | 659129..659221 | BSU06083 | seventh part of the ydzW pseudogene | |
| yetI | 786689..787264 | BSU07170 | ||
| yezB | 787264..787560 | BSU07180 | second part of the yetI pseudogene | |
| appA/1 | 1213537..1214001 | BSU11381 | ||
| appA/2 | 1214001..1215167 | BSU11382 | second part of the appA pseudogene | |
| ymfK/1 | 1760851..1761303 | BSU16890 | ||
| ymfK/2 | 1761302..1761640 | BSU16900 | second part of the ymfK pseudogene | |
| ymzE/1 | 1862937..1862993 | BSU17266 | ||
| ymzE/2 | 1862992..1863168 | BSU17267 | second part of the ymzE pseudogene | |
| yoyK/1 | 2278108..2278347 | BSU21598 | ||
| yoyK/2 | 2278340..2278456 | BSU21599 | second part of the yoyK pseudogene | |
| ypuC/1 | 2433631..2433885 | BSU23329 | ||
| ypuC/2 | 2433878..2434165 | BSU23330 | second part of the ypuC pseudogene | |
| yvzH | 3666933..3667016 | BSU35679 | ||
| yvzI | 3671416..3671622 | BSU35698 | ||
| yvzE | 3672929..3673525 | BSU35699 | ||
| tuaA/1 | 3658259..3658408 | BSU35609 | ||
| tuaA/2 | 3658407..3658892 | BSU35610 |
