degS

degS
168

two-component sensor kinase for exoenzyme and competence regulation, kinase activity is activated in response to inhibition of flagellar rotation

Locus
BSU_35500
Molecular weight
44.80 kDa
Isoelectric point
5.99
Protein length
Gene length
Function
regulation of degradative enzyme and genetic competence
Product
two-component sensor kinase
Essential
no
Synonyms
degS, sacU

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG4585 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,645,379  3,646,536
Phenotypes of a mutant
the mutation suppresses the mucoid phenotype of ''motA or motB'' mutants due to loss of DegU phosphorylation and concomitant reduced expression of the ''capB-capC-capA-capE'' operon PubMed
The protein
Catalyzed reaction/ biological activity
autophosphorylation, autodephosphorylation, phosphorylation of DegU on Asp-56 PubMed
ATP + protein L-histidine --> ADP + protein N-phospho-L-histidine (according to UniProt)
aa  12 ... 170: unknown DegS domain
Histidine kinase domain (aa 183-385) (according to UniProt)
aa 289 ... 384: HATPase_c
Structure
3GIG (PDB) (DesK, corresponds to the HisKA_3 and HATPase_c domains, 28% identity) PubMed
Modification
phosphorylation on Ser-76 PubMed, this stimulates phosphotransfer from His-189 to DegU PubMed, the phosphorylyation is performed by PrkD in vitro PubMed
autophosphorylation on His-189
Effectors of protein activity
DegQ (stimulation of autophosphorylation) PubMed
inhibition of flagellar rotation stimulates kinase activity PubMed
Cytoplasm (Homogeneous) PubMed
Expression and Regulation
Operons
Genes
Description
Regulation
induced by glucose (CcpA) PubMed
Regulatory mechanism
DegU: activation, in degU regulon
TnrA: repression, PubMed, in tnrA regulon
CcpA: activation, PubMed, in ccpA regulon
SinR: repression, PubMed, in sinR regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
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degSdegU

2025-03-19 23:42:14

Bzhu

120

d2120c3a90e78aa86a7316960e6c6ac9791f1ad9

180E2E6A277BD691F2D486B91512361FC857D302

Biological materials
Mutant
BKE35500 (degS::erm  trpC2) available at BGSCPubMed, upstream reverse: _UP1_CATAATTTCCCTCCGTCACG,  downstream forward: _UP4_TGACTATGATTTGTAAAATA
BKK35500 (degS::kan  trpC2) available at BGSCPubMed, upstream reverse: _UP1_CATAATTTCCCTCCGTCACG,  downstream forward: _UP4_TGACTATGATTTGTAAAATA
LacZ fusion
GP1982 (degS::lacZ cat, based on pAC5), available in Jörg Stülke's lab
Labs working on this gene/protein
Tarek Msadek, Institut Pasteur, Paris, France
References
Reviews
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Original Publications
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047CE33C0CC127DAD15D68D63843DF89F93ED3BF

Page visits: 6039

Time of last update: 2025-04-11 15:47:59

Author of last update: Jstuelk