yazA

yazA
168

similar to endonuclease

Locus
BSU_00350
Molecular weight
11.74 kDa
Isoelectric point
9.97
Protein length
99 aaSequenceBlast
Gene length
300 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
yazA
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2827 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
43,647  43,946
Additional information
the gene readily acquires mutations during adaptation to growth as pellicle biofilm PubMed
The protein
Protein family
UPF0213 family (single member, according to UniProt)
Domains
GIY-YIG-domain (aa 4-79) (according to UniProt)
Structure
1ZG2 (PDB) (from B. halodurans, 48% identity)
O31414 (AlphaFold)
Expression and Regulation
Operons
Genes
xpaC-yaaN-yaaO-tmk-darA-yaaR-holB-ricT-yabA-trmN6-yazA-yabC
Description
PubMed
Open in new tab

xpaC→yabC

2025-03-25 19:55:04

Jstuelk

196

adcd0181c3bf7f5a66d1644d176d0c60f2121a3a

87CEB0D67D1455F48A42F665A0B9A91B779AEC5D

Genes
darA-yaaR-holB-ricT-yabA-trmN6-yazA-yabC
Description
PubMed
Regulation
expressed during growth and the transition phase, expression is erduced in stationary phase PubMed
Open in new tab

darA→yabC

2025-04-05 02:05:55

ghost

180

62a125e6301e56c82f6a74dcb70741fe56737f41

DA0A2CE2876D38C223E4BA512D01D105B53BF136

Genes
tmk-darA-yaaR-holB-ricT-yabA-trmN6-yazA-yabC
Description
PubMed
Open in new tab

tmk→yabC

2025-04-05 08:43:18

Jstuelk

183

cae86a5ed186d19f5321f28f72d35514a5988afb

E9A27179465E2479F141CE804267881CAB860CC2

Biological materials
Mutant
MGNA-B902 (yazA::erm), available at the NBRP B. subtilis, Japan
BKE00350 (yazA::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_ACATTTCACGACGTAGAAGA,  downstream forward: _UP4_AAGCGGAACAGCAAGGAGGC
BKK00350 (yazA::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_ACATTTCACGACGTAGAAGA,  downstream forward: _UP4_AAGCGGAACAGCAAGGAGGC
References
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47859E62AABA5A57AC6F5F80CDE4ED52FC7F879F

Page visits: 2989

Time of last update: 2025-04-05 17:43:56

Author of last update: Jstuelk