Difference between revisions of "YpqP"
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[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 07:28, 20 October 2014
- Description: C-terminal part of the split gene spsM (together with yodU), spore envelope polysaccharide biosynthesis, in B. subtilis 168 the gene is disrupted by the SP-beta prophage
Gene name | ypqP |
Synonyms | |
Essential | no |
Product | unknown |
Function | spore envelope polysaccharide biosynthesis |
Gene expression levels in SubtiExpress: ypqP | |
MW, pI | - , - |
Gene length, protein length | 606 bp, SpsM: 341 aa |
Immediate neighbours | sprA, msrB |
Gene sequence (+200bp) | Protein sequence |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
membrane proteins, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU21670
Phenotypes of a mutant
Database entries
- BsubCyc: BSU21670
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
- rearrangement (deletion of the SP-beta prophage and generation of the spsM gene) occurs during sporulation and in response to DNA damage to allow production of spore polysaccharide PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): EpsC (for SpsM)
Extended information on the protein
- Kinetic information:
- Domains: SpsM: Polysacc_synt_2 domain (Pfam accession number, PF02719) in the 18–296-aa region PubMed
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU21670
- Structure:
- UniProt: P54183
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ypqP (accoriding to DBTBS)
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References