yazB

yazB
168

similar to transcription regulator (Xre family)

Locus
BSU_00800
Molecular weight
7.42 kDa
Isoelectric point
6.59
Protein length
69 aaSequenceBlast
Gene length
210 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
E.C.
null
Synonyms
yazB
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1396 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
87,401 → 87,610
The protein
Protein family
Xre family
Domains
HTH cro/C1-type domain (aa 10-64) (according to UniProt)
Structure
O31417 (AlphaFold)
Expression and Regulation
Operons
Genes
pabB-pabA-pabC-sul-folB-folK-yazB-dusB1-lysS
Description
PubMed
Regulation
translation repressed by tryptophan (MtrB) PubMed
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
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pabB→lysS

2025-04-04 11:44:49

Jstuelk

121

8c465dd3eec1aaa32d5e91206834f9bb99ef474a

7B9041CE94396BF42D285F7C0EDD3A2544761EEE

Biological materials
Mutant
MGNA-B926 (yazB::erm), available at the NBRP B. subtilis, Japan
BKE00800 (ΔyazB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AAATCCTTCTTGAGTATAAC,  downstream forward: _UP4_TAGAACAAATGAAAGGAGGA
BKK00800 (ΔyazB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_AAATCCTTCTTGAGTATAAC,  downstream forward: _UP4_TAGAACAAATGAAAGGAGGA
References
Leyn SA, Kazanov MD, Sernova NV, Ermakova EO, Novichkov PS, Rodionov DA Genomic reconstruction of the transcriptional regulatory network in Bacillus subtilis. Journal of bacteriology. 2013 Jun; 195(11):2463-73. doi:10.1128/JB.00140-13. PMID:23504016
de Saizieu A, Vankan P, Vockler C, van Loon AP The trp RNA-binding attenuation protein (TRAP) regulates the steady-state levels of transcripts of the Bacillus subtilis folate operon. Microbiology (Reading, England). 1997 Mar; 143 ( Pt 3):979-89. . PMID:9084182

F373EBC35805DC551E8AFF6FDC7E43D5587C4700

Page visits: 2529

Time of last update: 2025-04-10 16:05:04

Author of last update: Melvin.boenninger