yxbB

yxbB
168

similar to S-adenosyl-L-methionine-dependent methyltransferase

Locus
BSU_39890
Molecular weight
28.07 kDa
Isoelectric point
4.57
Protein length
244 aaSequenceBlast
Gene length
735 bpSequenceBlast
Function
unknown
Product
putative S-adenosyl-L-methionine-dependent methyltransferase
Essential
no
Synonyms
yxbB, yxaP
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

List of homologs in different organisms, belongs to COG2226 (Galperin et al., 2021)

This gene is a member of the following regulons

SigA regulon, CodY regulon, AbrB regulon

Gene
Coordinates
4,097,416  4,098,150
The protein
Protein family
Methyltransferase superfamily (according to UniProt)
Structure
3DLC (PDB) (from Methanococcus maripaludis, corresponds to aa 21 ... 193, 30% identity)
P46326 (AlphaFold)
Expression and Regulation
Operons
Genes
yxbB-yxbA-yxnB
Description
PubMed
Regulation
repressed by glucose (8-fold) PubMed
Regulatory mechanism
CodY: repression, PubMed, in codY regulon
AbrB: repression, PubMed, in abrB regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
Open in new tab

yxbB→yxnB

2025-03-10 20:59:52

ghost

87

4e575af872ba95e2cf90fe572e62500dbeeb237b

313B46B7C64D64F3047B680AB2010FF8D128F6EB

Genes
yxbB-yxbA-yxnB-asnH-yxaM
Description
PubMed
Regulation
repressed by glucose (8-fold) PubMed
Regulatory mechanism
CodY: repression, PubMed, in codY regulon
AbrB: repression, PubMed, in abrB regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
Open in new tab

yxbB→yxaM

2025-03-26 15:53:41

ghost

90

b92c3bd2849e2809ddcc3c320eae6fb9d682a8b4

5C58E2063585752CCDF4E84423501D1D48511254

Biological materials
Mutant
MGNA-B690 (yxbB::erm), available at the NBRP B. subtilis, Japan
BKE39890 (yxbB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCTTCAGCATCCTCCTTA,  downstream forward: _UP4_AAAGAAAAGGAAGGTGCATT
BKK39890 (yxbB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCTTCAGCATCCTCCTTA,  downstream forward: _UP4_AAAGAAAAGGAAGGTGCATT
References
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787BB72119DB1321A8281D7C46FED28CAEDBC97C

Page visits: 4483

Time of last update: 2025-04-04 03:25:37

Author of last update: Jstuelk