Difference between revisions of "YaaA"

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(New page: * '''Description:''' write here <br/><br/> {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''genE'' |- |style="background:#ABC...)
 
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* '''Description:''' write here <br/><br/>
 
* '''Description:''' write here <br/><br/>
  
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{| align="right" border="1" cellpadding="2"  
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    {| align="right" border="1" cellpadding="2"  
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|-
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    |-
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|style="background:#ABCDEF;" align="center"|'''Gene name'''
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    |style="background:#ABCDEF;" align="center"|'''Gene name'''
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|''genE''
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    |''yaaA''
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|-
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    |-
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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
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    |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
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|-
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    |-
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|style="background:#ABCDEF;" align="center"| '''Essential''' || write here
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    |style="background:#ABCDEF;" align="center"| '''Essential''' ||  
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|-
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    |-
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|style="background:#ABCDEF;" align="center"| '''Product''' || write here
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    |style="background:#ABCDEF;" align="center"| '''Product''' ||  
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|-
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    |-
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|style="background:#ABCDEF;" align="center"|'''Function''' || write here
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    |style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|-
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    |-
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || xx,x kDa, y.yy
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    |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 4.332 
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|-
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    |-
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || aaa bp, bbb amino acids
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    |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 213 bp, 71 aa
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|-
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    |-
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[genA]]'', ''[[genB]]''
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    |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
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|-
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    |-
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
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    |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yaaA_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_protein.txt Protein sequence]'''
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    |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yaaA_protein.txt Protein sequence]'''
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|-
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    |-
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|colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]]
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    |colspan="2" | '''Genetic context''' <br/> [[Image:yaaA_context.gif]]
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|-
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    |-
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|}
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    |}
  
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__TOC__
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    __TOC__
  
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<br/><br/>
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    <br/><br/>
  
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=The gene=
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    =The gene=
  
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=== Basic information ===
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    === Basic information ===
  
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* '''Coordinates (CDS):'''
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    * '''Coordinates:'''
  
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===Phenotypes of a mutant ===
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    ===Phenotypes of a mutant ===
  
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=== Database entries ===
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    === Database entries ===
  
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* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rocG.html]
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    * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yaaA.html]
  
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* '''SubtiList entry:'''
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    * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10067]
  
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=== Additional information===
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    === Additional information===
  
  
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=The protein=
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    =The protein=
  
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=== Basic information/ Evolution ===
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    === Basic information/ Evolution ===
  
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* '''Catalyzed reaction/ biological activity:'''  
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    * '''Catalyzed reaction/ biological activity:'''  
  
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* '''Protein family:'''
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    * '''Protein family:'''
  
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* '''Paralogous protein(s):'''
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    * '''Paralogous protein(s):'''
  
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=== Extended information on the protein ===
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    === Extended information on the protein ===
  
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* '''Kinetic information:'''
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    * '''Kinetic information:'''
  
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* '''Domains:'''  
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    * '''Domains:'''  
  
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* '''Modification:'''
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    * '''Modification:'''
  
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* '''Cofactor(s):'''
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    * '''Cofactor(s):'''
  
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* '''Effectors of protein activity:'''
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    * '''Effectors of protein activity:'''
  
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* '''Interactions:'''
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    * '''Interactions:'''
  
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* '''Localization:'''
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    * '''Localization:'''
  
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=== Database entries ===
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    === Database entries ===
  
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* '''Structure:'''
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    * '''Structure:'''
  
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* '''Swiss prot entry:'''
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    * '''Swiss prot entry:'''
  
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* '''KEGG entry:'''
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    * '''KEGG entry:'''
  
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* '''E.C. number:'''
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    * '''E.C. number:'''
  
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=== Additional information===
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    === Additional information===
  
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=Expression and regulation=
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    =Expression and regulation=
  
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* '''Operon:'''  
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    * '''Operon:'''  
  
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* '''Sigma factor:'''  
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    * '''Sigma factor:'''  
  
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* '''Regulation:'''  
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    * '''Regulation:'''  
  
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* '''Regulatory mechanism:'''  
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    * '''Regulatory mechanism:'''  
  
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* '''Additional information:'''  
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    * '''Additional information:'''  
  
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=Biological materials =
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    =Biological materials =
  
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* '''Mutant:'''
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    * '''Mutant:'''
  
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* '''Expression vector:'''
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    * '''Expression vector:'''
−
+
           
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* '''lacZ fusion:'''
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    * '''lacZ fusion:'''
  
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* '''GFP fusion:'''
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    * '''GFP fusion:'''
  
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* '''two-hybrid system:'''  
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    * '''two-hybrid system:'''  
  
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* '''Antibody:'''
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    * '''Antibody:'''
  
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=Labs working on this gene/protein=
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    =Labs working on this gene/protein=
  
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=Your additional remarks=
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    =Your additional remarks=
  
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=References=
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    =References=
  
−
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]
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    # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]

Revision as of 17:15, 29 January 2009

  • Description: write here

Gene name yaaA
Synonyms
Essential
Product
Function unknown
MW, pI 7 kDa, 4.332
Gene length, protein length 213 bp, 71 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
YaaA context.gif 


   



   =The gene=

   === Basic information ===

   * Coordinates:

   ===Phenotypes of a mutant ===

   === Database entries ===

   * DBTBS entry: [1]

   * SubtiList entry: [2]

   === Additional information===



   =The protein=

   === Basic information/ Evolution ===

   * Catalyzed reaction/ biological activity: 

   * Protein family:

   * Paralogous protein(s):

   === Extended information on the protein ===

   * Kinetic information:	

   * Domains: 

   * Modification:

   * Cofactor(s):

   * Effectors of protein activity:

   * Interactions:

   * Localization:

   === Database entries ===

   * Structure:	

   * Swiss prot entry:

   * KEGG entry:

   * E.C. number:

   === Additional information===

   =Expression and regulation=

   * Operon: 

   * Sigma factor: 

   * Regulation: 

   * Regulatory mechanism: 

   * Additional information: 

   =Biological materials =

   * Mutant:

   * Expression vector:
           
   * lacZ fusion:

   * GFP fusion:

   * two-hybrid system: 

   * Antibody:

   =Labs working on this gene/protein=

   =Your additional remarks=

   =References=

   # Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
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