Difference between revisions of "QdoI"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39980&redirect=T BSU39980]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yxaGH.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yxaGH.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39980&redirect=T BSU39980]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2H0V 2H0V]
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2H0V 2H0V]

Revision as of 15:14, 2 April 2014

  • Description: Fe-containing quercetin 2,3-dioxygenase

Gene name qdoI
Synonyms yxaG
Essential no
Product Fe-containing quercetin 2,3-dioxygenase
Function resistance to plant product quercetin
Gene expression levels in SubtiExpress: qdoI
MW, pI 37,4 kDa, 5.562
Gene length, protein length 1011 bp, 337 aa
Immediate neighbours yxaH, qdoR
Sequences Protein DNA DNA_with_flanks
Genetic context
YxaG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
QdoI expression.png
























Categories containing this gene/protein

resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)

This gene is a member of the following regulons

LmrA regulon, QdoR regulon

The gene

Basic information

  • Locus tag: BSU39980

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: oxidation of the flavonol quercetin with dioxygen, cleaving the central heterocyclic ring and releasing CO
  • Protein family:bicupin family
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): Mn(II) (preferred), but also active with Fe(II) snd Co(II) PubMed
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications