Difference between revisions of "SpeE"
| Line 58: | Line 58: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU37500&redirect=T BSU37500] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/speE-speB.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/speE-speB.html] | ||
| Line 95: | Line 96: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU37500&redirect=T BSU37500] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1IY9 1IY9] | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1IY9 1IY9] | ||
Revision as of 15:05, 2 April 2014
- Description: spermidine synthase
| Gene name | speE |
| Synonyms | ywhF |
| Essential | no |
| Product | spermidine synthase |
| Function | spermidine, polyamine biosynthesis |
| Gene expression levels in SubtiExpress: speE | |
| Metabolic function and regulation of this protein in SubtiPathways: speE | |
| MW, pI | 31 kDa, 5.068 |
| Gene length, protein length | 828 bp, 276 aa |
| Immediate neighbours | speB, pbpG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
miscellaneous metabolic pathways
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU37500
Phenotypes of a mutant
Database entries
- BsubCyc: BSU37500
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: S-adenosylmethioninamine + putrescine = 5'-S-methyl-5'-thioadenosine + spermidine (according to Swiss-Prot)
- Protein family: spermidine/spermine synthase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU37500
- Structure: 1IY9
- UniProt: P70998
- KEGG entry: [3]
- E.C. number: 2.5.1.16
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
A Sekowska, P Bertin, A Danchin
Characterization of polyamine synthesis pathway in Bacillus subtilis 168.
Mol Microbiol: 1998, 29(3);851-8
[PubMed:9723923]
[WorldCat.org]
[DOI]
(P p)
