Difference between revisions of "Xre"

From SubtiWiki
Jump to: navigation, search
Line 58: Line 58:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU12510&redirect=T BSU12510]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/xre.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/xre.html]
Line 95: Line 96:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU12510&redirect=T BSU12510]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 13:28, 2 April 2014

Gene name xre
Synonyms
Essential no
Product transcriptional repressor
Function regulation of PBSX prophage gene expression
Gene expression levels in SubtiExpress: xre
MW, pI 13 kDa, 8.448
Gene length, protein length 339 bp, 113 aa
Immediate neighbours xkdA, yjzJ
Sequences Protein DNA DNA_with_flanks
Genetic context
Xre context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Xre expression.png
























Categories containing this gene/protein

transcription factors and their control, PBSX prophage

This gene is a member of the following regulons

The Xre regulon

The gene

Basic information

  • Locus tag: BSU12510

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References