yhdY

yhdY
168

mechanosensitive channel, similar to MscS

Locus
BSU_09640
Molecular weight
42.38 kDa
Isoelectric point
5.76
Protein length
371 aaSequenceBlast
Gene length
1116 bpSequenceBlast
Function
resistance to osmotic downshock
Product
mechanosensitive channel, similar to MscS
Essential
no
Synonyms
yhdY
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0668 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,038,909  1,040,024
The protein
Protein family
MscS (TC 1.A.23) family (according to UniProt)
Structure
4AGE (PDB) (MscS from E. coli, corresponds to aa 129 ... 358 of YhdY, 27% identity) PubMed
O07594 (AlphaFold)
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
yhdY
Description
PubMed
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yhdY

2025-03-15 23:15:28

Jstuelk

55

c9eb5254864250857210d13055f05771a7bbf1b4

9C6592FDB7105CC739ED109D40ECB38451B6971A

Additional information
the mRNA is cleaved by RNase III PubMed
Biological materials
Mutant
MGNA-A701 (yhdY::erm), available at the NBRP B. subtilis, Japan
1A958 ( yhdY::erm), PubMed, available at BGSC
1A958 ( yhdY::erm), PubMed, available at BGSC
BKE09640 (yhdY::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGACTGTCTCCCCTCTAT,  downstream forward: _UP4_TAAAAGAGAGACTTCGTCTG
BKK09640 (yhdY::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGACTGTCTCCCCTCTAT,  downstream forward: _UP4_TAAAAGAGAGACTTCGTCTG
References
Reviews
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Original Publications
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Labs working on this gene/protein
Erhard Bremer, University of Marburg, Germany homepage

50DC162B3A7798F8D10B8373968AD333F197360B

Page visits: 2215

Time of last update: 2025-04-03 23:13:25

Author of last update: Jstuelk