ydgH

ydgH
168

similar to drug exporter

Locus
BSU_05650
Molecular weight
95.29 kDa
Isoelectric point
5.14
Protein length
885 aaSequenceBlast
Gene length
2658 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
E.C.
null
Synonyms
ydgH
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2409 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
609,388  612,045
The protein
Protein family
resistance-nodulation-cell division (RND) (TC 2.A.6) family (with YdfJ and SwrC, according to UniProt)
Structure
6AJF (PDB) (from Mycobacterium smegmatis, corresponds to aa 2 ... 370 and 686 ... 885, 24% identity) PubMed
P96706 (AlphaFold)
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
ydgG-ydgH
Description
PubMed
Regulation
induced by DNA damage (LexA) PubMed
Regulatory mechanism
LexA: repression, PubMed, in lexA regulon
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ydgG→ydgH

2025-04-03 09:07:14

ghost

82

e6eeda0069ad9243b72689582654b3e2748f74b9

AB6C7A5F537BF1933DB842601F21431DC5CF3B62

Biological materials
Mutant
MGNA-C161 (ydgH::erm), available at the NBRP B. subtilis, Japan
BKE05650 (ydgH::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CCACTTGAATTTGATGATTG,  downstream forward: _UP4_TAATCGAGAGAAGAGTGATG
BKK05650 (ydgH::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CCACTTGAATTTGATGATTG,  downstream forward: _UP4_TAATCGAGAGAAGAGTGATG
References
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1632474628BEA113F297897D152276A1AB73BAE8

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Time of last update: 2025-04-04 23:35:48

Author of last update: Jstuelk