yddJ

yddJ
168

ICEBs1 exclusion factor, protects the donor cells from cell death after conjugation

Locus
BSU_04990
Molecular weight
14.54 kDa
Isoelectric point
4.52
Protein length
126 aaSequenceBlast
Gene length
381 bpSequenceBlast
Function
prevention of redundant transfer of ICEBs1 into host cells that already contain a copy of the element
Product
ICEBs1 exclusion factor
Essential
no
E.C.
null
Synonyms
yddJ
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

List of homologs in different organisms

This gene is a member of the following regulons

AbrB regulon, ImmR regulon

Gene
Coordinates
545,595  545,975
The protein
Structure
P96647 (AlphaFold)
Localization
putative lipoprotein, attached to the cell membrane PubMed
Expression and Regulation
Operons
Genes
yddJ
Description
PubMed
Regulatory mechanism
AbrB: repression, PubMed, in abrB regulon
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yddJ

2025-04-04 21:39:22

Bzhu

55

aadb88622c1ae3170506bc4fd9885eb1742f82a5

3F9C466366EF0476723C6CDA65655A071B0F1713

Genes
xis-ydzL-devI-ydcP-ydcQ-nicK-S172-ramS-ramT-ramA-conB-conC-conD-conE-yddF-conG-cwlT-yddI-yddJ
Description
PubMed
Regulatory mechanism
ImmR: repression, PubMed, in immR regulon
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xis->yddJ

2025-04-04 00:35:31

Bzhu

88

9225e26ee70027d168e8ea0db13fb48c93ef1ef8

DE8D2BDC2F23AB45C58B0FE511E7B4816A65A489

Biological materials
Mutant
BKE04990 (yddJ::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAAATAAACATTACCTCCT,  downstream forward: _UP4_TAAACCGTGTGTTTACTCCT
BKK04990 (yddJ::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAAATAAACATTACCTCCT,  downstream forward: _UP4_TAAACCGTGTGTTTACTCCT
References
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2FB1C9435AE924F8E450AFA81F800196A871F2D0

Page visits: 2939

Time of last update: 2025-04-06 02:59:26

Author of last update: Jstuelk