Difference between revisions of "YdbP"

From SubtiWiki
Jump to: navigation, search
Line 55: Line 55:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU04550&redirect=T BSU04550]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ydbP.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ydbP.html]
Line 92: Line 93:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU04550&redirect=T BSU04550]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 13:01, 2 April 2014

  • Description: similar to thioredoxin

Gene name ydbP
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ydbP
MW, pI 12 kDa, 4.392
Gene length, protein length 318 bp, 106 aa
Immediate neighbours ydbO, ddl
Sequences Protein DNA DNA_with_flanks
Genetic context
YdbP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdbP expression.png
























Categories containing this gene/protein

electron transport/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU04550

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ydbP (according to DBTBS)
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

A Petersohn, J Bernhardt, U Gerth, D Höper, T Koburger, U Völker, M Hecker
Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.
J Bacteriol: 1999, 181(18);5718-24
[PubMed:10482513] [WorldCat.org] [DOI] (P p)