lrpC

lrpC
168

sequence-independent DNA-binding and DNA-bending protein (Lrp family), facilitates the formation of higher order protein-DNA complexes

Locus
BSU_04250
Molecular weight
16.31 kDa
Isoelectric point
7.74
Protein length
144 aaSequenceBlast
Gene length
435 bpSequenceBlast
Function
DNA repair/ recombination
Product
DNA-binding and -bending protein
Essential
no
Synonyms
lrpC, ydaI
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1522 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
476,059  476,493
The protein
Protein family
(Lrp family)
Domains
HTH asnC-type domain (aa 3-64) (according to UniProt)
Structure
2CFX (PDB) PubMed
P96582 (AlphaFold)
Expression and Regulation
Operons
Genes
lrpC-topB
Description
PubMed
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
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lrpC-topB

2025-04-06 15:24:23

Jstuelk

101

7ea663ea3dd5b88b87bf4ca1c3bba54b149de92b

D61F5F3480351B26116444E791717619ADCA51D9

Additional information
50 ... 300 molecules per cell PubMed
Biological materials
Mutant
GP3567 (ΔlrpC::aphA3), available in Jörg Stülke's lab
MGNA-C106 (ydaI::erm), available at the NBRP B. subtilis, Japan
BKE04250 (lrpC::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTTCAACATCCTTCTTTT,  downstream forward: _UP4_TAGAGAGTGCCGCGCGAAGT
BKK04250 (lrpC::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTTCAACATCCTTCTTTT,  downstream forward: _UP4_TAGAGAGTGCCGCGCGAAGT
References
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Time of last update: 2025-04-11 06:56:08

Author of last update: Jstuelk