Difference between revisions of "YckB"
| Line 55: | Line 55: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU03380&redirect=T BSU03380] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
| Line 94: | Line 95: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU03380&redirect=T BSU03380] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2IEE 2IEE] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2IEE 2IEE] | ||
Revision as of 12:57, 2 April 2014
- Description: similar to amino acid ABC transporter (binding protein)
| Gene name | yckB |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: yckB | |
| Interactions involving this protein in SubtInteract: YckB | |
| MW, pI | 31 kDa, 8.492 |
| Gene length, protein length | 861 bp, 287 aa |
| Immediate neighbours | yckA, yckC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
ABC transporters, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03380
Phenotypes of a mutant
Database entries
- BsubCyc: BSU03380
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: bacterial solute-binding protein 3 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: associated to the membrane (via YckA) PubMed
Database entries
- BsubCyc: BSU03380
- Structure: 2IEE
- UniProt: P42400
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
George D Glekas, Brendan J Mulhern, Abigail Kroc, Keegan A Duelfer, Victor Lei, Christopher V Rao, George W Ordal
The Bacillus subtilis chemoreceptor McpC senses multiple ligands using two discrete mechanisms.
J Biol Chem: 2012, 287(47);39412-8
[PubMed:23038252]
[WorldCat.org]
[DOI]
(I p)
Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453]
[WorldCat.org]
[DOI]
(P p)
