ybgB

ybgB
168

putative immunity protein

Locus
BSU_02380
Molecular weight
10.14 kDa
Isoelectric point
8.47
Protein length
91 aaSequenceBlast
Gene length
276 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
E.C.
null
Synonyms
ybgB
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG5658 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
258,532  258,807
The protein
Structure
O31460 (AlphaFold)
Paralogous protein(s)
SdpI, YfhL
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
ybgB
Description
PubMed
Regulation
induced by glucosamine (gamR) PubMed
Regulatory mechanism
GamR: repression, PubMed, in gamR regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
SigY: sigma factor, PubMed, in sigY regulon
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ybgB

2025-03-29 22:48:52

ghost

83

aa150d8f4048e97710523ec752be2e95bb6f7642

58B24A562E28D5C27BC0F9F8FB90BED534B72519

Genes
gamR-ybgB
Description
PubMed
Regulation
induced by glucosamine (gamR) PubMed
induced by glucosamine (GamR) PubMed
Regulatory mechanism
GamR: repression, PubMed, in gamR regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
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gamR→ybgB

2025-03-10 03:43:29

ghost

92

23ad24e5d0f0ebe864f8ce62d459ff58ea2562d9

E34905CD5A79F10FB8D4BF3FBA89AF47E5096F33

Biological materials
Mutant
BKE02380 (ybgB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAGAACCACCATTCCCTT,  downstream forward: _UP4_TAAATCAAACAGCCAGAATA
BKK02380 (ybgB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAGAACCACCATTCCCTT,  downstream forward: _UP4_TAAATCAAACAGCCAGAATA
References
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2E0FBCA66FB88EDFD345FA289F776C7CA23976F5

Page visits: 3502

Time of last update: 2025-04-06 06:31:35

Author of last update: Melvin.boenninger