Difference between revisions of "Program"

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(→‎Session IV: Spores/sporulation)
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= Wednesday 10th April 2013 =
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= Tuesday 29th April 2014 =
 
▪ 8:00 – 9.00 REGISTRATION
 
▪ 8:00 – 9.00 REGISTRATION
 
▪ 9:00 – 9:10 – Welcome Introduction
 
▪ 9:00 – 9:10 – Welcome Introduction
  
 
== Session I [[Metabolism]] ==
 
== Session I [[Metabolism]] ==
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CHAIR: [[Leendert Hamoen]]
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CHAIR: [[Jan Maarten van Dijl]]  
  
 
* 9:10 – 9:25 – [[Ken-ichi Yoshida]], Kobe University, Japan
 
* 9:10 – 9:25 – [[Ken-ichi Yoshida]], Kobe University, Japan
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** ''Bacillus subtilis'' possesses two distinct [[tpi|triosephosphate isomerases]]
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** Inositol dehydrogenases in ''Geobacillus kaustophilus'' are regulated by a [[Crh]] homolog but not by glucose
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* 9:30 – 9:45 – Kambiz Morabbi Heravi, University of Stuttgart, DE
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* 9:30 – 9:45 – Matthieu Jules, INRA, MICALIS, France
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** Mannitol utilization system of ''Bacillus subtilis'': activation of the ''mtl'' promoters by [[MtlR]]
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** New regulation and catabolic repression of the uptake of gluconeogenic carbon sources
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* 9:50 – 10:05 – Marian Wenzel, University of Stuttgart,DE
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* 9:50 – 10:05 – [[Uwe Völker]], University Medicine Greifswald, Germany
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** Development of a self-inducible ''Bacillus subtilis'' expression system for application in high-cell-density fermentations.
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** Adaptation of ''Bacillus subtilis'' [[carbon core metabolism]] to simultaneous nutrient limitation and osmotic challenge: a multi-omics perspective.
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* 10:10 – 10:25 – [[Elisabeth Härtig]], Technical University Braunschweig, DE
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* 10:10 – 10:25 – Raphael Michna, General Microbiology, Göttingen, Germany
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** Transcriptional activation by the [[AlsR]] regulator of ''Bacillus subtilis'' comprises effector binding, oligomerization, DNA binding and DNA bending
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** ''Subti''Wiki and its compagnons: Tools for data integration of ''Bacillus subtilis''
 
* 10:30 – 10:50 – COFFEE BREAK
 
* 10:30 – 10:50 – COFFEE BREAK
  
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== Session II [[biofilm formation|Biofilms]] ==  
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== Session II Synthetic Biology and [[Secretion]] ==
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CHAIR: Dirk-Jan Scheffers
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CHAIR: [[Nicola Stanley-Wall]]
  
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* 10:50 – 11:05 – Laura Hobley, University of Dundee, UK
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* 10:50 – 11:05 – [[Phillippe Noirot]],INRA, France
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** [[BslA]] is a novel self-polymerising protein that forms a hydrophobic layer around ''Bacillus subtilis'' [[biofilm formation|biofilms]]
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** Streamlining the ''Bacillus subtilis'' genome: from proof-of-concept to cell factories
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* 11:10 – 11:25 – [[Akos T Kovacs]], University of Jena, DE
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* 11:10 – 11:25 – Iolanda Ferro, University of Potsdam, Germany
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** Living on the surface: Biofilm formation and surface motility of ''Bacillus subtilis''
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** Emerging role of tRNA charging for protein expression in ''Bacillus licheniformis''
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* 11:30 – 11:45 – [[Ole Økstad]], University of Oslo, NO
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* 11:30 – 11:45 – Marcel Hillebrand, DSM, Delft, Netherlands
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** Cyclic diguanylate (c-di-GMP) regulation of biofilm formation in ''Bacillus subtilis''
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** Signal sequence fusion libraries for increased enzyme production
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* 11:50 – 12:05 – [[Jörg Stülke]], University of Göttingen, DE
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* 11:50 – 12:05 – Jolanda Neef, University of Groningen (UMCG), the Netherlands
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** c-di-AMP, an essential signalling nucleotide in ''Bacillus subtilis''
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** A novel expression platform for the production of cell wall-bound and secreted staphylococcal antigens
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* 12:10 – 12:25 – Lynne Cairns, University of Dundee, UK
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* 12:10 – 12:25 – Giulia Barbieri, University of Pavia, Italy
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** Investigation of the role of the motility protein, [[YvyG]], and potential regulation by tyrosine phosphorylation in ''Bacillus subtilis''
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** [[CodY]] regulates the expression of two proteases in ''B. subtilis''
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* 12:30 – 13:40 LUNCH (+ BACIP MEETING)
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* 12:30 – 14:00 LUNCH (+ BACIP MEETING)
  
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== Session III: Beyond ''Bacillus subtilis'', a focus on non-subtilis species ==
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== Session III: Stress response and regulation ==
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CHAIR: [[Jan Maarten van Dijl]]
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CHAIR: [[Leendert Hamoen]]
  
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* 13:40 – 13:55 – [[Anne-Brit Kolsto|Anne-Brit Kolstø]], University of Oslo, NO
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* 14:00 – 14:15 – [[Thorsten Mascher]], Ludwig-Maximilians-Universität München, Germany
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** TBA
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** Cannibalism Stress Response in ''Bacillus subtilis''
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* 14:00 – 14:15 – Rebecca Biedendieck, Technische Universitat, Braunschweig, DE
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* 14:20 – 14:35 – Sandra Maaß, Ernst-Moritz-Arndt Universität Greifswald, Germany
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** Production and secretion of recombinant proteins in ''Bacillus megaterium''
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** Absolute protein quantification of stress and starvation responses in ''Bacillus subtilis''.
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* 14:20 – 14:35 – Per Bullough, University of Sheffield, UK
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* 14:40 – 14:55 – Tamara Hoffmann, Philipps-University Marburg, Germany
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** Surface architecture of endospores of the ''Bacillus cereus''/anthracis/thuringiensis family at the subnanometer scale.
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** Balancing the osmotic gradient: transcriptional control of ''[[opuAA]]'' expression in response to osmotic stress and the cytoplasmic compatible solute pool
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* 14:40 – 14:55 – Susanne Pohl, Newcastle University, UK
 
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** Oxidative stress in ''Bacillus anthracis''
 
 
* 15:00 – 15:15 –Mette Dines-Cantor, Chr. Hansen A/S, Hørsholm, DK
 
* 15:00 – 15:15 –Mette Dines-Cantor, Chr. Hansen A/S, Hørsholm, DK
 
** Screening for new ''Bacillus''-based probiotic feed additives for the pig industry.
 
** Screening for new ''Bacillus''-based probiotic feed additives for the pig industry.
 
* 15:20 – 15:35 – Jurgen Seppen, Amsterdam Medical Centre, NL
 
* 15:20 – 15:35 – Jurgen Seppen, Amsterdam Medical Centre, NL
 
** The utility ''Bacillus subtilis'' for intestinal gene transfer.
 
** The utility ''Bacillus subtilis'' for intestinal gene transfer.
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* 13:40 – 13:55 – [[Anne-Brit Kolsto|Anne-Brit Kolstø]], University of Oslo, NO
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** TBA
 
* 15:40 – 16:00 – COFFEE BREAK
 
* 15:40 – 16:00 – COFFEE BREAK
  
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* 18.00 – 19.30 BACELL STEERING GROUP MEETING
 
* 18.00 – 19.30 BACELL STEERING GROUP MEETING
  
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== 19:30 – WINE RECEPTION AND DINNER AT THE Great North Museum, Barras Bridge ==
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== 19:30 – WINE RECEPTION AND DINNER AT THE Great North Museum, Barras Bridge == [[biofilm formation|Biofilms]]
  
 
= Thursday April 11th 2013 =
 
= Thursday April 11th 2013 =

Revision as of 10:12, 24 March 2014

Tuesday 29th April 2014

▪ 8:00 – 9.00 REGISTRATION ▪ 9:00 – 9:10 – Welcome Introduction

Session I Metabolism

CHAIR: Jan Maarten van Dijl

  • 9:10 – 9:25 – Ken-ichi Yoshida, Kobe University, Japan
    • Inositol dehydrogenases in Geobacillus kaustophilus are regulated by a Crh homolog but not by glucose
  • 9:30 – 9:45 – Matthieu Jules, INRA, MICALIS, France
    • New regulation and catabolic repression of the uptake of gluconeogenic carbon sources
  • 9:50 – 10:05 – Uwe Völker, University Medicine Greifswald, Germany
    • Adaptation of Bacillus subtilis carbon core metabolism to simultaneous nutrient limitation and osmotic challenge: a multi-omics perspective.
  • 10:10 – 10:25 – Raphael Michna, General Microbiology, Göttingen, Germany
    • SubtiWiki and its compagnons: Tools for data integration of Bacillus subtilis
  • 10:30 – 10:50 – COFFEE BREAK

Session II Synthetic Biology and Secretion

CHAIR: Nicola Stanley-Wall

  • 10:50 – 11:05 – Phillippe Noirot,INRA, France
    • Streamlining the Bacillus subtilis genome: from proof-of-concept to cell factories
  • 11:10 – 11:25 – Iolanda Ferro, University of Potsdam, Germany
    • Emerging role of tRNA charging for protein expression in Bacillus licheniformis
  • 11:30 – 11:45 – Marcel Hillebrand, DSM, Delft, Netherlands
    • Signal sequence fusion libraries for increased enzyme production
  • 11:50 – 12:05 – Jolanda Neef, University of Groningen (UMCG), the Netherlands
    • A novel expression platform for the production of cell wall-bound and secreted staphylococcal antigens
  • 12:10 – 12:25 – Giulia Barbieri, University of Pavia, Italy
    • CodY regulates the expression of two proteases in B. subtilis
  • 12:30 – 14:00 LUNCH (+ BACIP MEETING)

Session III: Stress response and regulation

CHAIR: Leendert Hamoen

  • 14:00 – 14:15 – Thorsten Mascher, Ludwig-Maximilians-Universität München, Germany
    • Cannibalism Stress Response in Bacillus subtilis
  • 14:20 – 14:35 – Sandra Maaß, Ernst-Moritz-Arndt Universität Greifswald, Germany
    • Absolute protein quantification of stress and starvation responses in Bacillus subtilis.
  • 14:40 – 14:55 – Tamara Hoffmann, Philipps-University Marburg, Germany
    • Balancing the osmotic gradient: transcriptional control of opuAA expression in response to osmotic stress and the cytoplasmic compatible solute pool
  • 15:00 – 15:15 –Mette Dines-Cantor, Chr. Hansen A/S, Hørsholm, DK
    • Screening for new Bacillus-based probiotic feed additives for the pig industry.
  • 15:20 – 15:35 – Jurgen Seppen, Amsterdam Medical Centre, NL
    • The utility Bacillus subtilis for intestinal gene transfer.
  • 13:40 – 13:55 – Anne-Brit Kolstø, University of Oslo, NO
    • TBA
  • 15:40 – 16:00 – COFFEE BREAK

Session IV: Spores/sporulation

CHAIR: Nicola Stanley-Wall

  • 16:00 – 16:15 – Stanley Brul, University of Amsterdam, NL
    • Functional genomics for food preservation: inhibiting bacterial spore germination
  • 16:20 – 16:35 – Ewa Bukowska-Faniband, University of Lund, SE
    • Cortex synthesis during Bacillus subtilis sporulation depends on the transpeptidase activity of SpoVD
  • 16:40 – 16:55 – Robyn Eijlander, University of Groningen, NL
    • SporeWeb: Interactive visualization of gene regulatory networks during the complete sporulation cycle of Bacillus subtilis
  • 17:00 – 17:15– Katie Jameson, University of York, UK
  • 17:20 – 17:35 – Katja Nagler, German Aerospace Centre, Cologne, DE
    • High salinity has negative effects on Bacillus subtilis spore germination and outgrowth
  • 17.40 – 17.55– Patrik Florek, Slovak Academy of Sciences, SK
  • 18.00 – 19.30 BACELL STEERING GROUP MEETING

== 19:30 – WINE RECEPTION AND DINNER AT THE Great North Museum, Barras Bridge == Biofilms

Thursday April 11th 2013

Session V: Synthetic Biology

CHAIR: Thomas Wiegert

  • 9:00 – 9:15 – Elbrich Hendricks, University of Groningen, NL
    • iGEM team Groningen 2012: Food Wardens – Grand Prize Winners
  • 9:20 – 9:35 – Francois Coutte, University of Lille, FR
    • Genetic engineering of Bacillus subtilis assisted by computational modelling to overproduce lipopeptide biosurfactants
  • 9:40 – 9:55 – Maarten Mols, University of Groningen, NL
    • Improving the Bacilllus cell factory by cell envelope engineering
  • 10:00 – 10:15 – Tjeerd van Ris, DSM, Delft, NL
    • Improved enzyme production by codon pair optimization
  • 10:20 – 10:35 – Alexander Webb, Imperial College London, UK
    • Parasight
  • 10:40 – 11:00 – COFFEE BREAK

Session VI: Cell walls and secretion

CHAIR: Ole Økstad

  • 11:00 – 11:15 – Patricia Dominguez-Cuevas, Newcastle University, UK
    • Actin cytoskeleton Mbl homologue coordinates cell wall hydrolases and LytE activity during cell elongation.
  • 11:20 – 11:35 – David Noone, Trinity College Dublin, IE
    • Several regulatory mechanisms combine to make expression and cell association of the CwlO D,L-endopeptidase-type autolysin responsive to growth conditions in Bacillus subtilis
  • 11:40 – 11:55 – Dirk-Jan Scheffers, University of Groningen, NL
    • Substrate availability guides peptidoglycan synthesis
  • 12:00 – 12:15 – Thomas Wiegert, University of Applied Sciences Zittau, DE
  • 12:20 – 12:35 – Vivianne Goosens, University Medical Centre Groningen, NL
    • A role for TatAC in Bacillus subtilis twin-arginine protein translocation
  • 12:40 – 13:40 – LUNCH

Session VII: Regulation & Replication

CHAIR: Henrik Strahl

  • 13:40 – 13:55 – Sara Kesel, Ludwig-Maximilians-University, DE
  • 14:00 – 14:15 –Jakob Engman, Lund University, SE
    • Aggregation of the YjbH adaptor protein as a mechanism of Spx regulation.
  • 14:20 – 14:35 – Fabian Commichau, University of Göttingen, DE
  • 14:40 – 14:55– Thorsten Mascher, Ludwig-Maximilians-University, DE
    • (Tools for studying the) Regulatory dynamics of peptide antibiotic detoxification modules in Bacillus subtilis
  • 15:00 – 15:15 – Vladimir Bidnenko, INRA, Jouy en Josas, FR
    • Distinct activities of co-essential Bacillus subtilis flap-endonucleases, Pol I and YpcP, in DNA replication and repair
  • 15:20 – 15:35 – Panos Soultanas, University of Nottingham, UK
    • Functional interplay of DnaE polymerase, DnaG primase and DnaC helicase within a ternary complex during lagging strand DNA replication in Bacillus subtilis
  • 15:40 – 16:00 – COFFEE BREAK

Session VIII: Division

CHAIR: Alan Nielson

  • 16:00 – 16:15 – Peter Graumann, Universitat Freiburg, DE
    • Movement of up to 3.4mm long MreB filaments at various angles underneath the cell membrane and their intrinsic membrane affinity
  • 16:20 – 16:35 – Hiraku Takada, Tokyo University of Agriculture, Japan
    • Involvement of essential lipid synthetic enzyme, PlsX, in the cell division machinery
  • 16:40 – 16:55 – Ilkay Celik, Newcastle University, UK
  • 17:00 – 17:15 – Robert Cleverley, Newcastle University, UK
  • 17:20 – 17:35 – Alex Dajkovic, University of California Irvine, USA
    • Organization of FtsZ polymers in living Bacillus subtilis cells
  • 17:40 – 17:55 – Romain Mercier, Newcastle University, UK
    • Excess membrane synthesis drives a primitive mode of cell proliferation

END OF MEETING

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