Difference between revisions of "YtqB"
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| − | * '''Description:''' | + | * '''Description:''' SAM-dependent class I methyltransferase <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || SAM-dependent class I methyltransferase |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
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<br/><br/> | <br/><br/> | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' SAM {{PubMed|24637210}} |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''[[SubtInteract|Interactions]]:''' |
| + | ** forms dimers {{PubMed|24637210}} | ||
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
=== Database entries === | === Database entries === | ||
* '''Structure:''' | * '''Structure:''' | ||
| + | ** [http://pdb.org/pdb/search/structidSearch.do?structureId=4PON 4PON], apoenzyme {{PubMed|24637210}} | ||
| + | ** [http://pdb.org/pdb/search/structidSearch.do?structureId=4POO 4POO], complex with SAM {{PubMed|24637210}} | ||
* '''UniProt:''' [http://www.uniprot.org/uniprot/O34614 O34614] | * '''UniProt:''' [http://www.uniprot.org/uniprot/O34614 O34614] | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ytqB_3120964_3121548_1 ytqB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ytqB_3120964_3121548_1 ytqB] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
| − | + | <pubmed> 24637210 </pubmed> | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 08:28, 19 March 2014
- Description: SAM-dependent class I methyltransferase
| Gene name | ytqB |
| Synonyms | |
| Essential | no |
| Product | SAM-dependent class I methyltransferase |
| Function | unknown |
| Gene expression levels in SubtiExpress: ytqB | |
| MW, pI | 21 kDa, 5.564 |
| Gene length, protein length | 582 bp, 194 aa |
| Immediate neighbours | ytqA, ytpB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU30490
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Interactions:
- forms dimers PubMed
Database entries
- UniProt: O34614
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Sun Cheol Park, Wan Seok Song, Sung-il Yoon
Structural analysis of a putative SAM-dependent methyltransferase, YtqB, from Bacillus subtilis.
Biochem Biophys Res Commun: 2014, 446(4);921-6
[PubMed:24637210]
[WorldCat.org]
[DOI]
(I p)
