Difference between revisions of "Main Page"

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<big>'''Paper of the month: December 2013'''</big>  
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<big>'''Paper of the month: January 2014'''</big>  
* Intercellular signaling requires the transfer of information between two different cells. Now, [http://www.ncbi.nlm.nih.gov/pubmed/24243021 Mastny et al.] from the labs of [[David Rudner]] and Tim Clausen show how the protease [[CtpB]] is activated by substrate binding to cleave off the inhibitory domain of [[SpoIVFA]] to allow ultimately allow processing of pro-[[SigK]] by [[SpoIVFB]].
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* The expression of [[ribosomal proteins]] is often subject to feedback regulation by the binding of [[ribosomal proteins]] to their mRNA leaders. A new study by [http://www.ncbi.nlm.nih.gov/pubmed/24310371 Fu et al.] demonstrate that a heterodimer of [[RpsF]] and [[RpsR]] binds a structure in the mRNA leader of the ''[[rpsF]]-[[ssbA]]-[[rpsR]]'' operon and suggests autoregulation
* '''Relevant ''Subti''Wiki pages:''' [[David Rudner]], [[sporulation]], [[CtpB]], [[SpoIVB]], [[SpoIVFA]], [[SpoIVFB]]
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* '''Relevant ''Subti''Wiki pages:''' [[ribosomal proteins]], [[RpsF]], [[RpsR]]
<pubmed> 24243021 </pubmed>
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<pubmed> 24310371 </pubmed>
 
* [[Previous papers of the month]]
 
* [[Previous papers of the month]]
  

Revision as of 19:40, 12 January 2014

Welcome to SubtiWiki! - Bacillus subtilis annotation the "wiki" way!

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Contact: General Microbiology, University of Göttingen, send mail


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Now online: A new description of SubtiWiki and its acompanying modules in the 2014 Database issue of Nucleic Acids Research



Paper of the month: January 2014

Yang Fu, Kaila Deiorio-Haggar, Mark W Soo, Michelle M Meyer
Bacterial RNA motif in the 5' UTR of rpsF interacts with an S6:S18 complex.
RNA: 2014, 20(2);168-76
[PubMed:24310371] [WorldCat.org] [DOI] (I p)


New procedure for account creation:

  • Due to massive spam attacks, we had to change our policy for the creation of accounts. If you want to create an account, just send me a mail. We will create the account for you as quickly as possible, then you can change your password. This does not affect existing accounts, which remain active.
  • Please remember that all members of the Bacillus community are invited to create accounts and to contribute to SubtiWiki!



News in SubtiWiki:

  • April 2013: SubtiWiki uses a new, faster Mediawiki platform! The times for page access are significantly reduced. Enjoy!
  • March 2013: updated Excel files that map all genes to categories and regulons as well as the general updated identity mapping of all genes were uploaded.
  • October 2012: the essential genes have been categorized
  • September 2012: 300 mutant strains available at the BGSC were added to the corresponding gene pages
  • August 2012: SubtiExpress, the new compagnon of SubtiWiki devoted to gene expression is online! Try it out!
  • April 2012: Links for expression data under 104 different conditions (based on Nicolas et al., 2012) have been added to the expression section of the individual gene pages
  • April 2011: SubtInteract, a presentation of protein-protein interactions in B. subtilis, is online!
  • December 2010: SubtiCellPublisher allows the conversion of CellDesigner diagrams to navigatable presentations in the style of SubtiPathways



Genes (examples) Additional pages
spo0A SubtiPathways
glnA SubtInteract
rny SubtiExpress
psdA Regulons
pckA methods
dnaA metabolism
rnpA categories
sigB genome-wide analyses
ptkA list of plasmids
mreC labs working on Bacillus
ccpA the people behind SubtiWiki
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Publications describing SubtiWiki and SubtiPathways: