Difference between revisions of "YxxG"

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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
{{SubtiWiki regulon|[[DegU regulon]]}},
 
{{SubtiWiki regulon|[[DegU regulon]]}},
 +
{{SubtiWiki regulon|[[WapA regulon]]}},
 
{{SubtiWiki regulon|[[YvrHb regulon]]}}
 
{{SubtiWiki regulon|[[YvrHb regulon]]}}
  
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=== Additional information===
 
=== Additional information===
 
 
  
  
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:''' phosphorylation on (Tyr-102 OR Ser-105) [http://www.ncbi.nlm.nih.gov/sites/entrez/17218307 PubMed]
 
* '''Modification:''' phosphorylation on (Tyr-102 OR Ser-105) [http://www.ncbi.nlm.nih.gov/sites/entrez/17218307 PubMed]
  
* '''Cofactor(s):'''
+
* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxxG_4023054_4023482_-1 yxxG] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxxG_4023054_4023482_-1 yxxG] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|23199363}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[DegU]]-P: transcription repression {{PubMed|9537385}}
 
** [[DegU]]-P: transcription repression {{PubMed|9537385}}
 
** activated by [[YvrHb]]  [http://www.ncbi.nlm.nih.gov/sites/entrez/16306698 PubMed]
 
** activated by [[YvrHb]]  [http://www.ncbi.nlm.nih.gov/sites/entrez/16306698 PubMed]
 +
** [[WalR]]: transcription repression {{PubMed|23199363}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
  
<pubmed>16672620, 20815827,17218307,16306698 9537385 23572593</pubmed>
+
<pubmed>16672620, 20815827,17218307,16306698 9537385 23572593 23199363</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 11:36, 29 December 2013

  • Description: immunity protein, protects the cell against the toxic activity of WapA

Gene name yxxG
Synonyms wapI
Essential no
Product immunity protein
Function intercellular competition
Gene expression levels in SubtiExpress: yxxG
Interactions involving this protein in SubtInteract: YxxG
MW, pI 16 kDa, 4.424
Gene length, protein length 426 bp, 142 aa
Immediate neighbours yxiF, wapA
Sequences Protein DNA DNA_with_flanks
Genetic context
YxxG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YxxG expression.png















Categories containing this gene/protein

toxins, antitoxins and immunity against toxins, phosphoproteins,

This gene is a member of the following regulons

DegU regulon, WapA regulon, YvrHb regulon

The gene

Basic information

  • Locus tag: BSU39220

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification: phosphorylation on (Tyr-102 OR Ser-105) PubMed
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed at high salt concentration (DegU-P) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References