Difference between revisions of "GerW"

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* '''[[Localization]]:'''
 
* '''[[Localization]]:'''
 
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** in the dormant spore {{PubMed|23921501}}
 
=== Database entries ===
 
=== Database entries ===
  

Revision as of 16:07, 8 August 2013

Gene name gerW
Synonyms ytfJ
Essential no
Product germination protein
Function germination in response to L-alanine
Gene expression levels in SubtiExpress: gerW
MW, pI 16 kDa, 4.988
Gene length, protein length 453 bp, 151 aa
Immediate neighbours tpx, ytfI
Sequences Protein DNA DNA_with_flanks
Genetic context
YtfJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtfJ expression.png















Categories containing this gene/protein

germination

This gene is a member of the following regulons

SigF regulon

The gene

Basic information

  • Locus tag: BSU29500

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early during sporulation in the forespore (SigF) PubMed
    • repressed by casamino acids PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References