Difference between revisions of "GatC"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=2DF4 2DF4] ([[GatA]]-[[GatB]]-[[GatC]] complex from ''Staphylococcus aureus'') {{PubMed|16809541}} |
* '''UniProt:''' [http://www.uniprot.org/uniprot/O06492 O06492] | * '''UniProt:''' [http://www.uniprot.org/uniprot/O06492 O06492] | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gatC_728732_729022_1 gatC] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gatC_728732_729022_1 gatC] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
| − | <pubmed>9342321,20882017, 22517742</pubmed> | + | <pubmed>9342321,20882017, 22517742 16809541</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:46, 12 July 2013
- Description: production of glutamyl-tRNA(Gln)
| Gene name | gatC |
| Synonyms | yerL, yedA |
| Essential | yes PubMed |
| Product | glutamyl-tRNA(Gln) amidotransferase (subunit C) |
| Function | translation |
| Gene expression levels in SubtiExpress: gatC | |
| Interactions involving this protein in SubtInteract: GatC | |
| Metabolic function and regulation of this protein in SubtiPathways: tRNA charging | |
| MW, pI | 10 kDa, 4.596 |
| Gene length, protein length | 288 bp, 96 aa |
| Immediate neighbours | opuE, gatA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
translation, essential genes, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU06670
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + L-glutamyl-tRNA(Gln) + L-glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L-glutamate (according to Swiss-Prot)
- Protein family: gatC family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- phosphorylated on Arg-3 PubMed
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: O06492
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Alexander K W Elsholz, Kürsad Turgay, Stephan Michalik, Bernd Hessling, Katrin Gronau, Dan Oertel, Ulrike Mäder, Jörg Bernhardt, Dörte Becher, Michael Hecker, Ulf Gerth
Global impact of protein arginine phosphorylation on the physiology of Bacillus subtilis.
Proc Natl Acad Sci U S A: 2012, 109(19);7451-6
[PubMed:22517742]
[WorldCat.org]
[DOI]
(I p)
Takuhiro Ito, Shigeyuki Yokoyama
Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions.
Nature: 2010, 467(7315);612-6
[PubMed:20882017]
[WorldCat.org]
[DOI]
(I p)
Akiyoshi Nakamura, Min Yao, Sarin Chimnaronk, Naoki Sakai, Isao Tanaka
Ammonia channel couples glutaminase with transamidase reactions in GatCAB.
Science: 2006, 312(5782);1954-8
[PubMed:16809541]
[WorldCat.org]
[DOI]
(I p)
A W Curnow, K w Hong, R Yuan, S i Kim, O Martins, W Winkler, T M Henkin, D Söll
Glu-tRNAGln amidotransferase: a novel heterotrimeric enzyme required for correct decoding of glutamine codons during translation.
Proc Natl Acad Sci U S A: 1997, 94(22);11819-26
[PubMed:9342321]
[WorldCat.org]
[DOI]
(P p)
