Difference between revisions of "GamP"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
− | + | {{SubtiWiki regulon|[[YbgA regulon]]}} | |
=The gene= | =The gene= | ||
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=Expression and regulation= | =Expression and regulation= | ||
− | * '''Operon:''' ''[[gamA]]-[[gamP]]'' | + | * '''Operon:''' ''[[gamA]]-[[gamP]]'' {{PubMed|23667565}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=nagP_254907_256802_-1 gamP] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=nagP_254907_256802_-1 gamP] {{PubMed|22383849}} | ||
− | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|23667565}} |
* '''Regulation:''' | * '''Regulation:''' | ||
+ | ** induced by glucosamine ([[YbgA]]) {{PubMed|23667565}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
+ | ** [[YbgA]]: transcription repression {{PubMed|23667565}} | ||
* '''Additional information:''' | * '''Additional information:''' |
Revision as of 16:55, 24 May 2013
- Description: glucosamine-specific phosphotransferase system, EIICBA of the PTS
Gene name | gamP |
Synonyms | ybfS, yzfA |
Essential | no |
Product | glucosamine-specific phosphotransferase system, EIICBA |
Function | glucosamine uptake and phosphorylation |
Gene expression levels in SubtiExpress: gamP | |
Interactions involving this protein in SubtInteract: GamP | |
Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
MW, pI | 67 kDa, 5.472 |
Gene length, protein length | 1893 bp, 631 aa |
Immediate neighbours | gltP, gamA |
Gene sequence (+200bp) | Protein sequence |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
cell wall degradation/ turnover, phosphotransferase systems, utilization of specific carbon sources, membrane proteins, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02350
Phenotypes of a mutant
delayed growth with glucosamine as the single carbon source PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: protein EIIA N(pi)-phospho-L-histidine + protein EIIB = protein EIIA + protein EIIB N(pi)-phospho-L-histidine/cysteine (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: membrane PubMed
Database entries
- Structure:
- UniProt: P39816
- KEGG entry: [2]
- E.C. number: 2.7.1.69
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant: QB6098 (aphA3), available in Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711]
[WorldCat.org]
[DOI]
(I p)
Jonathan Reizer, Steffi Bachem, Aiala Reizer, Maryvonne Arnaud, Milton H Saier, Jörg Stülke
Novel phosphotransferase system genes revealed by genome analysis - the complete complement of PTS proteins encoded within the genome of Bacillus subtilis.
Microbiology (Reading): 1999, 145 ( Pt 12);3419-3429
[PubMed:10627040]
[WorldCat.org]
[DOI]
(P p)