Difference between revisions of "BsrB"

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(References)
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* '''Description:''' small RNA <br/><br/>
+
* '''Description:''' 6S RNA<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || small RNA
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|style="background:#ABCDEF;" align="center"| '''Product''' || 6S RNA
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|style="background:#ABCDEF;" align="center"|'''Function''' || antagonist of [[SigA]]
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  bp
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|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  203 bp
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''bsrB'' [http://www.ncbi.nlm.nih.gov/sites/entrez/11886746 PubMed]
  
 
* '''Sigma factor:'''  
 
* '''Sigma factor:'''  
  
* '''Regulation:'''  
+
* '''Regulation:''' expressed during vegetative growth[http://www.ncbi.nlm.nih.gov/sites/entrez/11886746 PubMed]
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  

Revision as of 13:18, 20 February 2009

  • Description: 6S RNA

Gene name bsrB
Synonyms
Essential no
Product 6S RNA
Function antagonist of SigA
Gene length 203 bp
Immediate neighbours
Gene sequence (+200bp)
Genetic context
File:GenE context.gif








The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: no entry
  • Structure:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: expressed during vegetative growthPubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:


Labs working on this gene/RNA

Kouji Nakamura, Tsukuba, University, Japan

Your additional remarks

References

  1. Ando Y, Asari S, Suzuma S, Yamane K, Nakamura K (2002) Expression of a small RNA, BS203 RNA, from the yocI-yocJ intergenic region of Bacillus subtilis genome.FEMS Microbiol. Lett. 207: 29-33. PubMed
  2. Barrick JE, Sudarsan N, Weinberg Z, Ruzzo WL, Breaker RR(2005) 6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter.RNA 11: 774-784. PubMed
  3. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed